| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310456
Identifier: 83310456
GI number: 83310456
Start: 1470915
End: 1471394
Strand: Reverse
Name: 83310456
Synonym: amb1357
Alternate gene names: NA
Gene position: 1471394-1470915 (Counterclockwise)
Preceding gene: 83310457
Following gene: 83310453
Centisome position: 29.62
GC content: 65.42
Gene sequence:
>480_bases ATGCCATTCGCCCTAGGATTATCCTCGAAATTGTATAATTCGGCAGTCGGGAGGGACCCGATGGCAAGTCTGAACCCTGA GAAGCTGACCTTGGCGGAGACCGGCGCCCTGGCTCTCGACGAGGCGGCGCAGGAACTGGACAGGGCCTGCGACACGGCCA GCTTCCTCAAGGCGCTGGAGCGCAACCAGCGGGTTTGGCGCACGCTGGCCCACATCGCCGCCGCGCGGGCCTGGCAGTTC CCCAGCCAGCGGCAGGTGGCCTATGCCCTGTCGACGGACGAGCACGGCAACGGCGCCAATGACGAACGCGTCAACACCTT GATCGACATCAACCGGGAGGTCTCGGACATCCTGGCCCATGGCGACGACATGACCCGCCTGCGCGAACGGGCCTATGCCA TCTGGGAAGCCCGCGGCCGTCCCCATGGCCAGGATCTCGAGCACTGGCTGCTGGCGGAAATGGAACTGTCCAGCGGCTGA
Upstream 100 bases:
>100_bases TGATGCAGGTCAAGGGTACCAGGGGGCGGACCGGCTGGCTTTGATATATGTCAGTGCCGAAAGTGTCATCCCAACATCAC TTAAGCGGCATTGAATCCCC
Downstream 100 bases:
>100_bases GCGCCGCCCCGCCCCCCTCACACCGTCCGGTCGGAAACACGGGCGTCCGGCAGATACTCCGCCGCTTCGTCCACCGGGAC CGGGCGGGCGAAGTGGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPFALGLSSKLYNSAVGRDPMASLNPEKLTLAETGALALDEAAQELDRACDTASFLKALERNQRVWRTLAHIAAARAWQF PSQRQVAYALSTDEHGNGANDERVNTLIDINREVSDILAHGDDMTRLRERAYAIWEARGRPHGQDLEHWLLAEMELSSG
Sequences:
>Translated_159_residues MPFALGLSSKLYNSAVGRDPMASLNPEKLTLAETGALALDEAAQELDRACDTASFLKALERNQRVWRTLAHIAAARAWQF PSQRQVAYALSTDEHGNGANDERVNTLIDINREVSDILAHGDDMTRLRERAYAIWEARGRPHGQDLEHWLLAEMELSSG >Mature_158_residues PFALGLSSKLYNSAVGRDPMASLNPEKLTLAETGALALDEAAQELDRACDTASFLKALERNQRVWRTLAHIAAARAWQFP SQRQVAYALSTDEHGNGANDERVNTLIDINREVSDILAHGDDMTRLRERAYAIWEARGRPHGQDLEHWLLAEMELSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17699; Mature: 17568
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFALGLSSKLYNSAVGRDPMASLNPEKLTLAETGALALDEAAQELDRACDTASFLKALE CCCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH RNQRVWRTLAHIAAARAWQFPSQRQVAYALSTDEHGNGANDERVNTLIDINREVSDILAH HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHC GDDMTRLRERAYAIWEARGRPHGQDLEHWLLAEMELSSG CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PFALGLSSKLYNSAVGRDPMASLNPEKLTLAETGALALDEAAQELDRACDTASFLKALE CCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH RNQRVWRTLAHIAAARAWQFPSQRQVAYALSTDEHGNGANDERVNTLIDINREVSDILAH HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHC GDDMTRLRERAYAIWEARGRPHGQDLEHWLLAEMELSSG CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA