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The map label for this gene is yiaO [C]

Identifier: 83310422

GI number: 83310422

Start: 1441583

End: 1442602

Strand: Reverse

Name: yiaO [C]

Synonym: amb1323

Alternate gene names: 83310422

Gene position: 1442602-1441583 (Counterclockwise)

Preceding gene: 83310423

Following gene: 83310421

Centisome position: 29.04

GC content: 68.43

Gene sequence:

>1020_bases
TTGCTGGGACGCATTCTGAGGCATGGACTGAGGCTGATGACCGCTGCCGTTATGGCCGCGCTCGCGGTCGTGTCCGTGCG
CCCCGTCTCCCATGCCGGGGCCGAGACCTGGATCGCCTCCTATCAATTCCCGCCGGGAGACATGCGCGACGACGCCATGC
GGAGCATCGCCCGGGCCATGGAGGCCCAGGGGATCACCATCCGCCTTTATGCCTCGGCCTCCCTGCTGCGTCCCGGCGAC
CAGTGGGGCGCCCTGACCAGCGGCAATATCGACATGGCGTTCATGCCGTCCGACTATCTGTTGGACCGCATGCCCCAACT
GGCGGTGCTGTCCCTGCCGACCATGGTGCGCAGCCGCCCCCATGCCGAGCGCATCGCCGCCTCGCCCGCCATGCGCGATC
TCAAGCACCAGATGGAAGCCGCCGGCGTGGTCATCCTGGCCGATTCCTGGATTCCCGGCGCCTATGCCAGCCGGCAGCGC
TGCGTCCAGACCCCCGCCGACGCCAAGGGCCTGCGGGCCCGGACCATCGGCCGCTTCATGGGCGAGTTCTGGGCGGGGGC
CGGGGCCGTGCCGGTTCCGGTCGTCACCTCGGACTCGCTGGGCACCCTGGTCAGCAACGACCTGATCGACATCGCCAATA
CCTCGGCCGCCACCTTGCTGTCACTCCACATGGAGCGCAAGTTCGCCTGCCTGATGGTCCCGGGCGATGCGGGTGCCCTG
TGGTATCTCTACGAGCCGATCATGGTGTCCAAGCGCCGCTACGACACCTTGGACGAAGCCCGGCGACAGGCACTGCACGC
CGCCGCCGCCGAAGCCGCCGCCAATCTGGCCGTCTCCCTGTCGCTGCTGGAGCGGCGCCTGGCCGGCAATTTCATCGCCG
CGGGAGTGGACGTGGTCAAACTGGATTTCGACGCCTTCGACGCCTGGCGCAAGCTGGCGCGGCGCACTGCCTGGAAGTCG
TTCCGCGACCATGTGCCGGGCGGCGGCGACATCCTCGACAAGATACAGGCCGTGGAGTGA

Upstream 100 bases:

>100_bases
AGGAAGAGGCCCGCGACGAGTCCGGCCTTCGGGAATAGTTGCCCAAAGCCCGCGAACGTGGTGCACTGTCACCCGGGGGA
TCATCGGGGGCGGCGGCGCT

Downstream 100 bases:

>100_bases
TCCGGTGAAGGAGACCAGCAAATCCGTCGCCCGCCGGGCGCGCACCCCCGAATTCATCACCCGCTATCTGGTCGGCCAGG
GCCTGGACATCGGCGGCGCC

Product: TRAP-type C4-dicarboxylate transport system

Products: NA

Alternate protein names: Trap Dicarboxylate Transporter- Dctp Subunit; Twin-Arginine Translocation Pathway Signal; TRAP-Type C4-Dicarboxylate Transport System; TRAP Dicarboxylate Family Transporter DctP Subunit; Signal Peptide; TRAP Transporter; TRAP Dicarboxylate Transporter Subunit DctP

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MLGRILRHGLRLMTAAVMAALAVVSVRPVSHAGAETWIASYQFPPGDMRDDAMRSIARAMEAQGITIRLYASASLLRPGD
QWGALTSGNIDMAFMPSDYLLDRMPQLAVLSLPTMVRSRPHAERIAASPAMRDLKHQMEAAGVVILADSWIPGAYASRQR
CVQTPADAKGLRARTIGRFMGEFWAGAGAVPVPVVTSDSLGTLVSNDLIDIANTSAATLLSLHMERKFACLMVPGDAGAL
WYLYEPIMVSKRRYDTLDEARRQALHAAAAEAAANLAVSLSLLERRLAGNFIAAGVDVVKLDFDAFDAWRKLARRTAWKS
FRDHVPGGGDILDKIQAVE

Sequences:

>Translated_339_residues
MLGRILRHGLRLMTAAVMAALAVVSVRPVSHAGAETWIASYQFPPGDMRDDAMRSIARAMEAQGITIRLYASASLLRPGD
QWGALTSGNIDMAFMPSDYLLDRMPQLAVLSLPTMVRSRPHAERIAASPAMRDLKHQMEAAGVVILADSWIPGAYASRQR
CVQTPADAKGLRARTIGRFMGEFWAGAGAVPVPVVTSDSLGTLVSNDLIDIANTSAATLLSLHMERKFACLMVPGDAGAL
WYLYEPIMVSKRRYDTLDEARRQALHAAAAEAAANLAVSLSLLERRLAGNFIAAGVDVVKLDFDAFDAWRKLARRTAWKS
FRDHVPGGGDILDKIQAVE
>Mature_339_residues
MLGRILRHGLRLMTAAVMAALAVVSVRPVSHAGAETWIASYQFPPGDMRDDAMRSIARAMEAQGITIRLYASASLLRPGD
QWGALTSGNIDMAFMPSDYLLDRMPQLAVLSLPTMVRSRPHAERIAASPAMRDLKHQMEAAGVVILADSWIPGAYASRQR
CVQTPADAKGLRARTIGRFMGEFWAGAGAVPVPVVTSDSLGTLVSNDLIDIANTSAATLLSLHMERKFACLMVPGDAGAL
WYLYEPIMVSKRRYDTLDEARRQALHAAAAEAAANLAVSLSLLERRLAGNFIAAGVDVVKLDFDAFDAWRKLARRTAWKS
FRDHVPGGGDILDKIQAVE

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=284, Percent_Identity=26.056338028169, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36797; Mature: 36797

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRILRHGLRLMTAAVMAALAVVSVRPVSHAGAETWIASYQFPPGDMRDDAMRSIARAM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHEECCCCCCCCCHHHHHHHHHHH
EAQGITIRLYASASLLRPGDQWGALTSGNIDMAFMPSDYLLDRMPQLAVLSLPTMVRSRP
HHCCCEEEEEECCHHCCCCCCCCCEECCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCC
HAERIAASPAMRDLKHQMEAAGVVILADSWIPGAYASRQRCVQTPADAKGLRARTIGRFM
CHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
GEFWAGAGAVPVPVVTSDSLGTLVSNDLIDIANTSAATLLSLHMERKFACLMVPGDAGAL
HHHHCCCCCCCCCEEECCCHHHHHHCCHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCEE
WYLYEPIMVSKRRYDTLDEARRQALHAAAAEAAANLAVSLSLLERRLAGNFIAAGVDVVK
EEEHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEE
LDFDAFDAWRKLARRTAWKSFRDHVPGGGDILDKIQAVE
EEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MLGRILRHGLRLMTAAVMAALAVVSVRPVSHAGAETWIASYQFPPGDMRDDAMRSIARAM
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHEECCCCCCCCCHHHHHHHHHHH
EAQGITIRLYASASLLRPGDQWGALTSGNIDMAFMPSDYLLDRMPQLAVLSLPTMVRSRP
HHCCCEEEEEECCHHCCCCCCCCCEECCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCC
HAERIAASPAMRDLKHQMEAAGVVILADSWIPGAYASRQRCVQTPADAKGLRARTIGRFM
CHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH
GEFWAGAGAVPVPVVTSDSLGTLVSNDLIDIANTSAATLLSLHMERKFACLMVPGDAGAL
HHHHCCCCCCCCCEEECCCHHHHHHCCHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCEE
WYLYEPIMVSKRRYDTLDEARRQALHAAAAEAAANLAVSLSLLERRLAGNFIAAGVDVVK
EEEHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEE
LDFDAFDAWRKLARRTAWKSFRDHVPGGGDILDKIQAVE
EEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA