| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is iorB [H]
Identifier: 83310400
GI number: 83310400
Start: 1420614
End: 1422797
Strand: Reverse
Name: iorB [H]
Synonym: amb1301
Alternate gene names: 83310400
Gene position: 1422797-1420614 (Counterclockwise)
Preceding gene: 83310401
Following gene: 83310399
Centisome position: 28.64
GC content: 71.25
Gene sequence:
>2184_bases ATGAGCCTCGATCTGTCCCGGCGCGCCCTGCTGGGCTCCATGGCGGCCCTGACCGTGGCCTTCGCCCTGCCCCGCCCCTC TGGAGCCGCCGCCGCCTTGGCCAAGACCAACGATCCCGCCGAGGTGGACGGGTTCTTGGCCATCGGCGCCGACGGCAAGG TCACCGTCTATTGCGGCAAGGTCGATCTCGGCCAGGGCCTGCGCGTCGCCATCCGCCAGATGGCCGCCGAGGAACTGGGT ATCGGCATTGACTCCATCGCCCTGGTCGAGGGCGACACGGCGCTGACCCCCGACCAGGGACCCACCGCCGGCTCCACCGG CGTGGCCAAGGGCGGCGTGCAGATCCGCCAGGCGGCCGCCACGGCGCGTCAGGCCCTGATCCGCCTCGCCGCCGCAAGGC TGGACCTACCCGCCGAGGAACTGGATCTCCGCGACGGCGTGGTGGGCCCCCGGGAATCTGGCCGCTCCATCGCCATGGGC GATCTGGTGGGCGAGGGCGGCTTCGCCCTGAAGTTGGACCCCAAGGCGCCGCTGCGCAATCCCGCCGACTATCGCGTGGT GGGCAAGCCCCTGCCCCGCCCCGACCTGCCGGCCAAGGTCTGCGGCACCCATGTTTATGTCCACGACTTCAAGCTGCCCG GCATGCTGCATGGCCGCGTCATCCGCCCGCCCTCGGTGGGCGCCAGCCTGCTCCGGGTGGACGAGGCCTCCATCAAGGCC ATCCGCGGCGCCCGCGTGGTGCGCCTCAAGGACTTCCTGGCCGTGGTGGCCCCCCGCGAATGGGACGCCGTCCGCGCCGC CGGGATGCTGAAGGCGCAATGGTCGGATTCCGCCCCGCTGATGGGTCATCAGGCGGTGCGCGACTGGCTGAAGACCCCGC CCTTCGCCGCCGAGGAGGTGTTGAAGGCCAAGGGCGACGCCGCCGCCGCCCTGGCCGACGCGCCGCCCGCCGCCGAGTAT TACTGGCCGGTGCAGTCCCACGGCTCGCTGGGGCCGAGCTGCGCGGTGGCCCAGGTCAAAGACGGCGCCGCCACCATCTG GACCGCGTCGCAGGCCACCCACAAGTTCCGCCCCGCCTTGGCCGCCCTGCTGGGCCTGGGCGTGGACAAGGTGCGCATGG TCTATCTGGACGGCTCGGGCTGCTACGGCATGAACGGCCATGACGACGCCAGCGCCGACGCCGCCCTGCTGGCCAAGGCC ACGGGCAAGCCGGTCCGGGTCGCCTGGAGCCGGGATGACGAGCTGGCCTGGGACCCCAAGGGTCCGCCGCAATTGCTGGC CATTCGCGGCGCCATGGCGCCCTCCGGCCTGCTGGCCGGCTGGAGCACCGAGATGTGGCTCCCCAAGGCCACCGCCGGAC TGGTCAACGTGCCGTTGCTGGCCCCCGAGGCGGCGGGCATCGCCCAGCCCCAGGGCCTGATCACCGGCCTGATCTCCCAG AACGGCGATCCGCCCTATGCCGTCGCCGATCTGGAGGTCAAGGTCCACTGGCAGGCCGAAGCCCCCTTGCGCCCCAGCAA CATCCGCGCGCCGGGCAAGATCGCCAACACCTTCGCGGTGGAAGGCTATTTCGATGAGCTGTGCGCTGGCGTGGGGCTGG ACCCCCTGGTCACCCGCCTGATCGGCCTCCGGGATCTGCGGGGCGTCGCCGTGCTGACCAAGGCCGCGTCCATGATGGCC TGGGCGCCGCGCCCCTCGCCCAACCCCGCCGGCGACGGCACCGGGCGCGGCATCGCCTATGTTCACTACAAGCACTCGGA AACCTATGTGGGCATGGCCATGGAGGTCATGGTCGACCGCGACACCGGGCGCATCGCCATCAAGAAGGTGACCTGCGCCC ATGATTGCGGGCTGGTGATCAATCCCGACGCGCTGAAGATGCAGATCGAGGGCTGCATCCTCCAGACCCTGTCGCGCACC CTGCTGGAAGAGGTGGCCTTCGACGCCTCGCGCGTCACCTCCACCGACCAGTCCACCTACCCCATCCTCGGTTTCGGCGC GGTCCCCGACATCGCCATCGAGCTGCTGGACCGGCCCGACCAACCGCCCATGGGTGGCGGCGAAGCGGCCTGCGCCCCGG TGCCCGCCGCCCTGGCCAACGCGGTGTTCGACGCGGTGGGGGCAAGGCTGCGCACCGTGCCGTTCACGCCCGAGCGGGTG AAGGGAGTTTTACAGGCCTTGTAG
Upstream 100 bases:
>100_bases TGGCGGAGGTCAAGGAGGCGCTGGACGGCCATCTCTGCCGCTGCGGCAGCCACCAAAGAGTTCTCAAGGCCGTGATGCGC GCCGGCGGGAGGGACAAGTC
Downstream 100 bases:
>100_bases CCCACGATCCGACTAGCTACATTATTGCAATGGCAATTAGACGGAAACTACACAAACCATGACGGACATTCGCGACGGCT TCCTCGATTCCATCGGCAAC
Product: aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MSLDLSRRALLGSMAALTVAFALPRPSGAAAALAKTNDPAEVDGFLAIGADGKVTVYCGKVDLGQGLRVAIRQMAAEELG IGIDSIALVEGDTALTPDQGPTAGSTGVAKGGVQIRQAAATARQALIRLAAARLDLPAEELDLRDGVVGPRESGRSIAMG DLVGEGGFALKLDPKAPLRNPADYRVVGKPLPRPDLPAKVCGTHVYVHDFKLPGMLHGRVIRPPSVGASLLRVDEASIKA IRGARVVRLKDFLAVVAPREWDAVRAAGMLKAQWSDSAPLMGHQAVRDWLKTPPFAAEEVLKAKGDAAAALADAPPAAEY YWPVQSHGSLGPSCAVAQVKDGAATIWTASQATHKFRPALAALLGLGVDKVRMVYLDGSGCYGMNGHDDASADAALLAKA TGKPVRVAWSRDDELAWDPKGPPQLLAIRGAMAPSGLLAGWSTEMWLPKATAGLVNVPLLAPEAAGIAQPQGLITGLISQ NGDPPYAVADLEVKVHWQAEAPLRPSNIRAPGKIANTFAVEGYFDELCAGVGLDPLVTRLIGLRDLRGVAVLTKAASMMA WAPRPSPNPAGDGTGRGIAYVHYKHSETYVGMAMEVMVDRDTGRIAIKKVTCAHDCGLVINPDALKMQIEGCILQTLSRT LLEEVAFDASRVTSTDQSTYPILGFGAVPDIAIELLDRPDQPPMGGGEAACAPVPAALANAVFDAVGARLRTVPFTPERV KGVLQAL
Sequences:
>Translated_727_residues MSLDLSRRALLGSMAALTVAFALPRPSGAAAALAKTNDPAEVDGFLAIGADGKVTVYCGKVDLGQGLRVAIRQMAAEELG IGIDSIALVEGDTALTPDQGPTAGSTGVAKGGVQIRQAAATARQALIRLAAARLDLPAEELDLRDGVVGPRESGRSIAMG DLVGEGGFALKLDPKAPLRNPADYRVVGKPLPRPDLPAKVCGTHVYVHDFKLPGMLHGRVIRPPSVGASLLRVDEASIKA IRGARVVRLKDFLAVVAPREWDAVRAAGMLKAQWSDSAPLMGHQAVRDWLKTPPFAAEEVLKAKGDAAAALADAPPAAEY YWPVQSHGSLGPSCAVAQVKDGAATIWTASQATHKFRPALAALLGLGVDKVRMVYLDGSGCYGMNGHDDASADAALLAKA TGKPVRVAWSRDDELAWDPKGPPQLLAIRGAMAPSGLLAGWSTEMWLPKATAGLVNVPLLAPEAAGIAQPQGLITGLISQ NGDPPYAVADLEVKVHWQAEAPLRPSNIRAPGKIANTFAVEGYFDELCAGVGLDPLVTRLIGLRDLRGVAVLTKAASMMA WAPRPSPNPAGDGTGRGIAYVHYKHSETYVGMAMEVMVDRDTGRIAIKKVTCAHDCGLVINPDALKMQIEGCILQTLSRT LLEEVAFDASRVTSTDQSTYPILGFGAVPDIAIELLDRPDQPPMGGGEAACAPVPAALANAVFDAVGARLRTVPFTPERV KGVLQAL >Mature_726_residues SLDLSRRALLGSMAALTVAFALPRPSGAAAALAKTNDPAEVDGFLAIGADGKVTVYCGKVDLGQGLRVAIRQMAAEELGI GIDSIALVEGDTALTPDQGPTAGSTGVAKGGVQIRQAAATARQALIRLAAARLDLPAEELDLRDGVVGPRESGRSIAMGD LVGEGGFALKLDPKAPLRNPADYRVVGKPLPRPDLPAKVCGTHVYVHDFKLPGMLHGRVIRPPSVGASLLRVDEASIKAI RGARVVRLKDFLAVVAPREWDAVRAAGMLKAQWSDSAPLMGHQAVRDWLKTPPFAAEEVLKAKGDAAAALADAPPAAEYY WPVQSHGSLGPSCAVAQVKDGAATIWTASQATHKFRPALAALLGLGVDKVRMVYLDGSGCYGMNGHDDASADAALLAKAT GKPVRVAWSRDDELAWDPKGPPQLLAIRGAMAPSGLLAGWSTEMWLPKATAGLVNVPLLAPEAAGIAQPQGLITGLISQN GDPPYAVADLEVKVHWQAEAPLRPSNIRAPGKIANTFAVEGYFDELCAGVGLDPLVTRLIGLRDLRGVAVLTKAASMMAW APRPSPNPAGDGTGRGIAYVHYKHSETYVGMAMEVMVDRDTGRIAIKKVTCAHDCGLVINPDALKMQIEGCILQTLSRTL LEEVAFDASRVTSTDQSTYPILGFGAVPDIAIELLDRPDQPPMGGGEAACAPVPAALANAVFDAVGARLRTVPFTPERVK GVLQAL
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=145, Percent_Identity=29.6551724137931, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 76017; Mature: 75886
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDLSRRALLGSMAALTVAFALPRPSGAAAALAKTNDPAEVDGFLAIGADGKVTVYCGK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEECC VDLGQGLRVAIRQMAAEELGIGIDSIALVEGDTALTPDQGPTAGSTGVAKGGVQIRQAAA EECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TARQALIRLAAARLDLPAEELDLRDGVVGPRESGRSIAMGDLVGEGGFALKLDPKAPLRN HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCC PADYRVVGKPLPRPDLPAKVCGTHVYVHDFKLPGMLHGRVIRPPSVGASLLRVDEASIKA CCCCEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCEECCCCCCCHHEEECHHHHHH IRGARVVRLKDFLAVVAPREWDAVRAAGMLKAQWSDSAPLMGHQAVRDWLKTPPFAAEEV HCCCEEEEEHHHHHHHCCCCHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHH LKAKGDAAAALADAPPAAEYYWPVQSHGSLGPSCAVAQVKDGAATIWTASQATHKFRPAL HHCCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHH AALLGLGVDKVRMVYLDGSGCYGMNGHDDASADAALLAKATGKPVRVAWSRDDELAWDPK HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCC GPPQLLAIRGAMAPSGLLAGWSTEMWLPKATAGLVNVPLLAPEAAGIAQPQGLITGLISQ CCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHC NGDPPYAVADLEVKVHWQAEAPLRPSNIRAPGKIANTFAVEGYFDELCAGVGLDPLVTRL CCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHH IGLRDLRGVAVLTKAASMMAWAPRPSPNPAGDGTGRGIAYVHYKHSETYVGMAMEVMVDR HHHHHHCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEC DTGRIAIKKVTCAHDCGLVINPDALKMQIEGCILQTLSRTLLEEVAFDASRVTSTDQSTY CCCEEEEEEEEECCCCCEEECCHHHEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC PILGFGAVPDIAIELLDRPDQPPMGGGEAACAPVPAALANAVFDAVGARLRTVPFTPERV CEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHH KGVLQAL HHHHHCC >Mature Secondary Structure SLDLSRRALLGSMAALTVAFALPRPSGAAAALAKTNDPAEVDGFLAIGADGKVTVYCGK CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEECC VDLGQGLRVAIRQMAAEELGIGIDSIALVEGDTALTPDQGPTAGSTGVAKGGVQIRQAAA EECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH TARQALIRLAAARLDLPAEELDLRDGVVGPRESGRSIAMGDLVGEGGFALKLDPKAPLRN HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCC PADYRVVGKPLPRPDLPAKVCGTHVYVHDFKLPGMLHGRVIRPPSVGASLLRVDEASIKA CCCCEEECCCCCCCCCCHHHHCCEEEEEEECCCCCCCCCEECCCCCCCHHEEECHHHHHH IRGARVVRLKDFLAVVAPREWDAVRAAGMLKAQWSDSAPLMGHQAVRDWLKTPPFAAEEV HCCCEEEEEHHHHHHHCCCCHHHHHHCCEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHH LKAKGDAAAALADAPPAAEYYWPVQSHGSLGPSCAVAQVKDGAATIWTASQATHKFRPAL HHCCCCCCEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCHHHHHHHHHH AALLGLGVDKVRMVYLDGSGCYGMNGHDDASADAALLAKATGKPVRVAWSRDDELAWDPK HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCC GPPQLLAIRGAMAPSGLLAGWSTEMWLPKATAGLVNVPLLAPEAAGIAQPQGLITGLISQ CCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCEEECCEECCCCCCCCCCHHHHHHHHHC NGDPPYAVADLEVKVHWQAEAPLRPSNIRAPGKIANTFAVEGYFDELCAGVGLDPLVTRL CCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHH IGLRDLRGVAVLTKAASMMAWAPRPSPNPAGDGTGRGIAYVHYKHSETYVGMAMEVMVDR HHHHHHCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEEC DTGRIAIKKVTCAHDCGLVINPDALKMQIEGCILQTLSRTLLEEVAFDASRVTSTDQSTY CCCEEEEEEEEECCCCCEEECCHHHEEEHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC PILGFGAVPDIAIELLDRPDQPPMGGGEAACAPVPAALANAVFDAVGARLRTVPFTPERV CEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCHHHH KGVLQAL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]