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The map label for this gene is 83310358

Identifier: 83310358

GI number: 83310358

Start: 1341574

End: 1341939

Strand: Reverse

Name: 83310358

Synonym: amb1259

Alternate gene names: NA

Gene position: 1341939-1341574 (Counterclockwise)

Preceding gene: 83310361

Following gene: 83310355

Centisome position: 27.02

GC content: 65.85

Gene sequence:

>366_bases
ATGCTCAACACCAAGAAGCTGGGCCTCGTCCTCGGAGCCGCCCTCCTCGCTGCCCCGTTCGCCGCCTCTGCCGCCGATGC
CCCGGCCGCTTTCAACCAGTGCAAGGCCTGTCACAAGGTCGAAGCCGGCAAGCACGGCGTCGGCCCCAGCCTGTTCGGCG
TCTACGGCGCCAAGGCCGGCCACGCCGAGGGCTACAAGTATTCCGACAACCACGTGAAGTCGGGCATGGTCTGGGACGAT
GCCAACCTGGGCAAGTACCTGGCCGACCCCAAGGCCACCATTCCCGGCAACAAGATGGCCTTCGCCGGCCTGAAGAAGCC
CGAGGACGTGGCCGCCGTGGTCGCCTATCTGAAGACCCTGAAGTAA

Upstream 100 bases:

>100_bases
TGGACCGATTCTTGCCCTCAGCCTCTTGAATTCGACACAATCCTAGGGGATAAGGGACGCATCGCGCCACTCATCCATAC
CTGCGCAATTGGAGATTCTG

Downstream 100 bases:

>100_bases
GACTTCGGGATCTTGGGTTTCGGCGCCGCCGCCCTGGCAACGGGGCGGCGGCGTTGTTATTTGGAAAGCGCTCGTTGCGA
CGCCCTCAGGGGGAAAGACC

Product: cytochrome C2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLNTKKLGLVLGAALLAAPFAASAADAPAAFNQCKACHKVEAGKHGVGPSLFGVYGAKAGHAEGYKYSDNHVKSGMVWDD
ANLGKYLADPKATIPGNKMAFAGLKKPEDVAAVVAYLKTLK

Sequences:

>Translated_121_residues
MLNTKKLGLVLGAALLAAPFAASAADAPAAFNQCKACHKVEAGKHGVGPSLFGVYGAKAGHAEGYKYSDNHVKSGMVWDD
ANLGKYLADPKATIPGNKMAFAGLKKPEDVAAVVAYLKTLK
>Mature_121_residues
MLNTKKLGLVLGAALLAAPFAASAADAPAAFNQCKACHKVEAGKHGVGPSLFGVYGAKAGHAEGYKYSDNHVKSGMVWDD
ANLGKYLADPKATIPGNKMAFAGLKKPEDVAAVVAYLKTLK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=87, Percent_Identity=47.1264367816092, Blast_Score=89, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17566554, Length=87, Percent_Identity=42.5287356321839, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17539604, Length=87, Percent_Identity=40.2298850574713, Blast_Score=76, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322508, Length=100, Percent_Identity=47, Blast_Score=100, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6320796, Length=86, Percent_Identity=41.8604651162791, Blast_Score=89, Evalue=2e-19,
Organism=Drosophila melanogaster, GI17137204, Length=103, Percent_Identity=50.4854368932039, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17137228, Length=89, Percent_Identity=49.438202247191, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12502; Mature: 12502

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNTKKLGLVLGAALLAAPFAASAADAPAAFNQCKACHKVEAGKHGVGPSLFGVYGAKAG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
HAEGYKYSDNHVKSGMVWDDANLGKYLADPKATIPGNKMAFAGLKKPEDVAAVVAYLKTL
CCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MLNTKKLGLVLGAALLAAPFAASAADAPAAFNQCKACHKVEAGKHGVGPSLFGVYGAKAG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
HAEGYKYSDNHVKSGMVWDDANLGKYLADPKATIPGNKMAFAGLKKPEDVAAVVAYLKTL
CCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 221822 [H]