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The map label for this gene is 83310348

Identifier: 83310348

GI number: 83310348

Start: 1332634

End: 1334190

Strand: Reverse

Name: 83310348

Synonym: amb1249

Alternate gene names: NA

Gene position: 1334190-1332634 (Counterclockwise)

Preceding gene: 83310349

Following gene: 83310347

Centisome position: 26.86

GC content: 72.77

Gene sequence:

>1557_bases
ATGTTTGCACGCTTCCTGGCGCTGGCCTTTTGGGCCGCGCTCATTCCATCCGTCTGGGCCGCCCAGCCGGCGACACCCGG
CATCGGCGCCGAGGGCGACGTCTTCCAGGTGGTGCTGGTTCCCGGCACCGATGGCCGCACTTTGCTTTATCTCGCCGACC
TGGACGGCAACGCCCCCGTCGCCGGCGCCGCCATCGATGCCGAGGCCGAAGGCTGGAGCGGCAAGGCGGTACCGGCCGAG
GGGCCGGGCGCCTATGCCCTGGCCTGGGCGCCCCCCACCGCCGGAGCCGACCTCACCCTGGTGATCAGTGCCCAGGGGCG
CGACGACCTGCTGCTGGCCCGGGGCGTGGCGCCCTTGCCGCCGCCCGCCACCCCGCCCGCCCCAGTGGAGCATTGGCGCC
ACTGGACCGGCGGTGCCGCCATCGGCGCCGTGCTGGTGGTCGCCGCCTGGCTGCTGGGGCGGCGCGGGGCGGGAACGGCC
GTGCTGCTGCTGGTGCTGGCGGTACCCGCCGCGCGGGCGCATGAGGGTCACGACCACGCCGCCACGGCGGAGACCCCCGC
CGCCCAGCCCGGCGCCCTGCTGGTGATGGCCAAGCCCACCCAGTTCCTGCTGGGCATCCGCACCCAGAAGGTGGATTCCG
CCGAATCCGCCGAGACCGTCCGGGTGGTGGGCCGCGTGGTGCCCGATCCCGCCGGTTTCGCCCGGGTGCAGCCGTCGCAG
CCGGCCCGCATCGTCTCGGACCCTGAATTCCCCCTGCCCGTCCCCGGCCAAGGCGTCAAGCGCGGCCAGGTGATCGGAGT
GCTGGAACCGACGCTGTCGACCCTGGAGCGCTCGGACAAGCGGGCCAGCCTGTACCGGGTGGAAAGCGAGATCGCCATCA
CCGAGCGGGAATCCTCTCGCCAGGAAGCGCTGAAGGGACTGGTGGCCACCAAGCTGGTGGAGGACACCCGCACCCGCCTG
GACCAGCTGCGGCGCGAGCGCTCCCAGCTTCTGGGCACCGCCCTGGGCCGCGAACTGGTGCGCGCCCCCATCGACGGCGT
GGTCACCGACGTGCATGTGGTCCCCGGCGAGGTGGTGCCGGTGGACAAGGCCATGATCGAGATCGTCGACCCGACCCGGG
TGCGGGTCGAGGCGGTGATTCACGATCTGGCGCTGGCGGGCCGCATCGGCGCCGCCACCGCCGCCACCAAAGTACTGCCC
GATCAGGCGGTGGCGCTGTCCCTGCTGGGGGTCAGTCCCCGGGTCGATGCCCTGGACCAGGGCGTGCACGCCATCTTCGC
CGTGTCCGAGGCCCAGGCCCGCACCTTGCGCATCGGCATGCCGGTGGACGTCTTCCTGGCCACCGGAGCAACGAGGCTGC
GCATGGCGGTGCCGCGCTCGGCCATCGCCGAGTTCGGCGGCCGTCAGGTGGTGTTCGTGCGCGCCGCGCCCGAGACCTTC
GAGGCCCGCCCCATCCGCGTCGAGCGGATGGTCGGCCCCCTGGCCGAGATCGAGGGCGTCAAGACGGGCGAAAAGGTGGT
GATCCAGGGCGTCGAGCAACTGAAAGCGCTGAGGTAG

Upstream 100 bases:

>100_bases
GGTGACCCAGGCGCAGAGCGGACCGCCCGCCGAACCTCCCAGACTCTGATTCCGCACGCCTGAAGTCCGTCCGGATTCAC
TGTTTCGGGGATCACTTCCC

Downstream 100 bases:

>100_bases
CGATCATGTTCGATTCCATCATCGCTCTCAGCCTGCGTCACCGGCTGTTCGTCCTGGCCGCCGCCCTGGCGCTGACCGTC
TATGGCTCGCTGGTGCTGGC

Product: membrane-fusion protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; RND Multidrug Efflux Membrane Fusion Protein MexC; Membrane-Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; Secreted Protein

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MFARFLALAFWAALIPSVWAAQPATPGIGAEGDVFQVVLVPGTDGRTLLYLADLDGNAPVAGAAIDAEAEGWSGKAVPAE
GPGAYALAWAPPTAGADLTLVISAQGRDDLLLARGVAPLPPPATPPAPVEHWRHWTGGAAIGAVLVVAAWLLGRRGAGTA
VLLLVLAVPAARAHEGHDHAATAETPAAQPGALLVMAKPTQFLLGIRTQKVDSAESAETVRVVGRVVPDPAGFARVQPSQ
PARIVSDPEFPLPVPGQGVKRGQVIGVLEPTLSTLERSDKRASLYRVESEIAITERESSRQEALKGLVATKLVEDTRTRL
DQLRRERSQLLGTALGRELVRAPIDGVVTDVHVVPGEVVPVDKAMIEIVDPTRVRVEAVIHDLALAGRIGAATAATKVLP
DQAVALSLLGVSPRVDALDQGVHAIFAVSEAQARTLRIGMPVDVFLATGATRLRMAVPRSAIAEFGGRQVVFVRAAPETF
EARPIRVERMVGPLAEIEGVKTGEKVVIQGVEQLKALR

Sequences:

>Translated_518_residues
MFARFLALAFWAALIPSVWAAQPATPGIGAEGDVFQVVLVPGTDGRTLLYLADLDGNAPVAGAAIDAEAEGWSGKAVPAE
GPGAYALAWAPPTAGADLTLVISAQGRDDLLLARGVAPLPPPATPPAPVEHWRHWTGGAAIGAVLVVAAWLLGRRGAGTA
VLLLVLAVPAARAHEGHDHAATAETPAAQPGALLVMAKPTQFLLGIRTQKVDSAESAETVRVVGRVVPDPAGFARVQPSQ
PARIVSDPEFPLPVPGQGVKRGQVIGVLEPTLSTLERSDKRASLYRVESEIAITERESSRQEALKGLVATKLVEDTRTRL
DQLRRERSQLLGTALGRELVRAPIDGVVTDVHVVPGEVVPVDKAMIEIVDPTRVRVEAVIHDLALAGRIGAATAATKVLP
DQAVALSLLGVSPRVDALDQGVHAIFAVSEAQARTLRIGMPVDVFLATGATRLRMAVPRSAIAEFGGRQVVFVRAAPETF
EARPIRVERMVGPLAEIEGVKTGEKVVIQGVEQLKALR
>Mature_518_residues
MFARFLALAFWAALIPSVWAAQPATPGIGAEGDVFQVVLVPGTDGRTLLYLADLDGNAPVAGAAIDAEAEGWSGKAVPAE
GPGAYALAWAPPTAGADLTLVISAQGRDDLLLARGVAPLPPPATPPAPVEHWRHWTGGAAIGAVLVVAAWLLGRRGAGTA
VLLLVLAVPAARAHEGHDHAATAETPAAQPGALLVMAKPTQFLLGIRTQKVDSAESAETVRVVGRVVPDPAGFARVQPSQ
PARIVSDPEFPLPVPGQGVKRGQVIGVLEPTLSTLERSDKRASLYRVESEIAITERESSRQEALKGLVATKLVEDTRTRL
DQLRRERSQLLGTALGRELVRAPIDGVVTDVHVVPGEVVPVDKAMIEIVDPTRVRVEAVIHDLALAGRIGAATAATKVLP
DQAVALSLLGVSPRVDALDQGVHAIFAVSEAQARTLRIGMPVDVFLATGATRLRMAVPRSAIAEFGGRQVVFVRAAPETF
EARPIRVERMVGPLAEIEGVKTGEKVVIQGVEQLKALR

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54373; Mature: 54373

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFARFLALAFWAALIPSVWAAQPATPGIGAEGDVFQVVLVPGTDGRTLLYLADLDGNAPV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCC
AGAAIDAEAEGWSGKAVPAEGPGAYALAWAPPTAGADLTLVISAQGRDDLLLARGVAPLP
CCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCCC
PPATPPAPVEHWRHWTGGAAIGAVLVVAAWLLGRRGAGTAVLLLVLAVPAARAHEGHDHA
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCC
ATAETPAAQPGALLVMAKPTQFLLGIRTQKVDSAESAETVRVVGRVVPDPAGFARVQPSQ
CCCCCCCCCCCEEEEEECCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PARIVSDPEFPLPVPGQGVKRGQVIGVLEPTLSTLERSDKRASLYRVESEIAITERESSR
CCEECCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCHHHHEEECCCEEEECCHHHH
QEALKGLVATKLVEDTRTRLDQLRRERSQLLGTALGRELVRAPIDGVVTDVHVVPGEVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
VDKAMIEIVDPTRVRVEAVIHDLALAGRIGAATAATKVLPDQAVALSLLGVSPRVDALDQ
CCHHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHEECCCCCHHHHHC
GVHAIFAVSEAQARTLRIGMPVDVFLATGATRLRMAVPRSAIAEFGGRQVVFVRAAPETF
CCEEEEEECCCCCEEEEECCCCEEEEECCCHHEEECCCHHHHHHCCCCEEEEEEECCCCC
EARPIRVERMVGPLAEIEGVKTGEKVVIQGVEQLKALR
CCCCEEHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFARFLALAFWAALIPSVWAAQPATPGIGAEGDVFQVVLVPGTDGRTLLYLADLDGNAPV
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCC
AGAAIDAEAEGWSGKAVPAEGPGAYALAWAPPTAGADLTLVISAQGRDDLLLARGVAPLP
CCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCCC
PPATPPAPVEHWRHWTGGAAIGAVLVVAAWLLGRRGAGTAVLLLVLAVPAARAHEGHDHA
CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCC
ATAETPAAQPGALLVMAKPTQFLLGIRTQKVDSAESAETVRVVGRVVPDPAGFARVQPSQ
CCCCCCCCCCCEEEEEECCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PARIVSDPEFPLPVPGQGVKRGQVIGVLEPTLSTLERSDKRASLYRVESEIAITERESSR
CCEECCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCHHHHEEECCCEEEECCHHHH
QEALKGLVATKLVEDTRTRLDQLRRERSQLLGTALGRELVRAPIDGVVTDVHVVPGEVVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE
VDKAMIEIVDPTRVRVEAVIHDLALAGRIGAATAATKVLPDQAVALSLLGVSPRVDALDQ
CCHHHEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHEECCCCCHHHHHC
GVHAIFAVSEAQARTLRIGMPVDVFLATGATRLRMAVPRSAIAEFGGRQVVFVRAAPETF
CCEEEEEECCCCCEEEEECCCCEEEEECCCHHEEECCCHHHHHHCCCCEEEEEEECCCCC
EARPIRVERMVGPLAEIEGVKTGEKVVIQGVEQLKALR
CCCCEEHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA