Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310294

Identifier: 83310294

GI number: 83310294

Start: 1269056

End: 1269955

Strand: Reverse

Name: 83310294

Synonym: amb1195

Alternate gene names: NA

Gene position: 1269955-1269056 (Counterclockwise)

Preceding gene: 83310295

Following gene: 83310266

Centisome position: 25.57

GC content: 56.89

Gene sequence:

>900_bases
ATGGCACGCAAGCCCCCACCCGGCCCCGTACAAATGGCCTTTGAACGCCGCAGCCAGCGCATCGCCTTTGCCGATATTCA
GCCCCTCCGCCTGGTCGGTCCAGCAGTAAAGAAAACCCCGAAATATGCCCAGATCGCGGCGTCCATCCGAGATGTGGGAA
TCGTCGAACCACCCGTCGTGGCCAAAGATCGCTCGGAGGAGGGAAAATATCTGCTGCTCGACGGGCATCTGCGCATCGAG
ATTCTGAAGGAAATGGGCGAGACGTCCACCGATTGCCTGATCGCCACCGATGACGAGGGCTTCACCTACAACAAGCGGAT
CAATCGCATCGCCATCGTTCAGGAACACAGGATGATCCTGAAGGCTATCGAAGACGGCGTGCCCGAGGAACGGATCGCCA
GTTCCCTGAATGTCGATGTCGCCTATCTCCGCCGCAAGACCGCGATTCTGAATGGAATCTGCCCGGAGGTGGTCGAGTTG
CTGCAGGACAAACACGTCCCCATCAACACCTTCGACCAGCTGAAGAAAATGCTGCCCATCCGCCAGATCGAAGCGGCGCA
ACTGATGATCGCCATGAATAAATATTCGATCAACTACGCCAAATCTCTGGTCAGCGCCACGCCCGCCTCCCAACTGATCA
ACCAGAAGGGCGCGAAACGGATCAACGGCCTCACCGATGAACAGATTGCCCTGATGGAGGAAGAATCGGCCAAGCTGGAC
CGGGAATTCCGTCAAATCGAACGGTCTTATGGCTCGGACCACCTTGATCTTGTGGTGATCAACGGGTTTCTGGACAGGCT
TCTGGGCAATAACCGCATCGTCCGCTACCTCACCCTGAACTATCCCGAATTGCAGGCTGAATTCCAGCGCGTGACCGACA
GCCAGAAAAGTGCTGGCTGA

Upstream 100 bases:

>100_bases
TGGATGACGAGAATTTCGTCACCCTGCTGCGGGCCGAGGGGCTTGAGTCCGTCCCCCAGAATCTTGCCCGCCGCATTCAG
CGGGCGGAGGTGGCTTGACC

Downstream 100 bases:

>100_bases
CCTCCGGCGACAAGGGTACCCGGACCCGGCCCGAATGGCAAAGCGCGGGGACTGTGGGAGACGCCGTCGTGGGGGATGGA
TCAAGCACAGGGTGGGGATG

Product: transcriptional regulator

Products: NA

Alternate protein names: ParB-Like Nuclease; Plasmid Partitioning Protein; RepB Plasmid Partitioning Protein; Transcriptional Regulator; ParB Family Protein; Repb Plasmid Partition

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVVAKDRSEEGKYLLLDGHLRIE
ILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMILKAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVEL
LQDKHVPINTFDQLKKMLPIRQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD
REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG

Sequences:

>Translated_299_residues
MARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVVAKDRSEEGKYLLLDGHLRIE
ILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMILKAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVEL
LQDKHVPINTFDQLKKMLPIRQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD
REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG
>Mature_298_residues
ARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVVAKDRSEEGKYLLLDGHLRIEI
LKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMILKAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVELL
QDKHVPINTFDQLKKMLPIRQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLDR
EFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33721; Mature: 33590

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVV
CCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCC
AKDRSEEGKYLLLDGHLRIEILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMIL
CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCEEHHHCCEEEHHHHHHHHH
KAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVELLQDKHVPINTFDQLKKMLPI
HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCH
RQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG
HHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVV
CCCCCCCHHHHHHHHHCCEEEECCCCCHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCC
AKDRSEEGKYLLLDGHLRIEILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMIL
CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCEEHHHCCEEEHHHHHHHHH
KAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVELLQDKHVPINTFDQLKKMLPI
HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCH
RQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG
HHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA