| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310294
Identifier: 83310294
GI number: 83310294
Start: 1269056
End: 1269955
Strand: Reverse
Name: 83310294
Synonym: amb1195
Alternate gene names: NA
Gene position: 1269955-1269056 (Counterclockwise)
Preceding gene: 83310295
Following gene: 83310266
Centisome position: 25.57
GC content: 56.89
Gene sequence:
>900_bases ATGGCACGCAAGCCCCCACCCGGCCCCGTACAAATGGCCTTTGAACGCCGCAGCCAGCGCATCGCCTTTGCCGATATTCA GCCCCTCCGCCTGGTCGGTCCAGCAGTAAAGAAAACCCCGAAATATGCCCAGATCGCGGCGTCCATCCGAGATGTGGGAA TCGTCGAACCACCCGTCGTGGCCAAAGATCGCTCGGAGGAGGGAAAATATCTGCTGCTCGACGGGCATCTGCGCATCGAG ATTCTGAAGGAAATGGGCGAGACGTCCACCGATTGCCTGATCGCCACCGATGACGAGGGCTTCACCTACAACAAGCGGAT CAATCGCATCGCCATCGTTCAGGAACACAGGATGATCCTGAAGGCTATCGAAGACGGCGTGCCCGAGGAACGGATCGCCA GTTCCCTGAATGTCGATGTCGCCTATCTCCGCCGCAAGACCGCGATTCTGAATGGAATCTGCCCGGAGGTGGTCGAGTTG CTGCAGGACAAACACGTCCCCATCAACACCTTCGACCAGCTGAAGAAAATGCTGCCCATCCGCCAGATCGAAGCGGCGCA ACTGATGATCGCCATGAATAAATATTCGATCAACTACGCCAAATCTCTGGTCAGCGCCACGCCCGCCTCCCAACTGATCA ACCAGAAGGGCGCGAAACGGATCAACGGCCTCACCGATGAACAGATTGCCCTGATGGAGGAAGAATCGGCCAAGCTGGAC CGGGAATTCCGTCAAATCGAACGGTCTTATGGCTCGGACCACCTTGATCTTGTGGTGATCAACGGGTTTCTGGACAGGCT TCTGGGCAATAACCGCATCGTCCGCTACCTCACCCTGAACTATCCCGAATTGCAGGCTGAATTCCAGCGCGTGACCGACA GCCAGAAAAGTGCTGGCTGA
Upstream 100 bases:
>100_bases TGGATGACGAGAATTTCGTCACCCTGCTGCGGGCCGAGGGGCTTGAGTCCGTCCCCCAGAATCTTGCCCGCCGCATTCAG CGGGCGGAGGTGGCTTGACC
Downstream 100 bases:
>100_bases CCTCCGGCGACAAGGGTACCCGGACCCGGCCCGAATGGCAAAGCGCGGGGACTGTGGGAGACGCCGTCGTGGGGGATGGA TCAAGCACAGGGTGGGGATG
Product: transcriptional regulator
Products: NA
Alternate protein names: ParB-Like Nuclease; Plasmid Partitioning Protein; RepB Plasmid Partitioning Protein; Transcriptional Regulator; ParB Family Protein; Repb Plasmid Partition
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVVAKDRSEEGKYLLLDGHLRIE ILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMILKAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVEL LQDKHVPINTFDQLKKMLPIRQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG
Sequences:
>Translated_299_residues MARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVVAKDRSEEGKYLLLDGHLRIE ILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMILKAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVEL LQDKHVPINTFDQLKKMLPIRQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG >Mature_298_residues ARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVVAKDRSEEGKYLLLDGHLRIEI LKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMILKAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVELL QDKHVPINTFDQLKKMLPIRQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLDR EFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33721; Mature: 33590
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVV CCCCCCCCHHHHHHHHHCCEEEECCCCCHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCC AKDRSEEGKYLLLDGHLRIEILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMIL CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCEEHHHCCEEEHHHHHHHHH KAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVELLQDKHVPINTFDQLKKMLPI HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCH RQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG HHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ARKPPPGPVQMAFERRSQRIAFADIQPLRLVGPAVKKTPKYAQIAASIRDVGIVEPPVV CCCCCCCHHHHHHHHHCCEEEECCCCCHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCC AKDRSEEGKYLLLDGHLRIEILKEMGETSTDCLIATDDEGFTYNKRINRIAIVQEHRMIL CCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEECCCCCEEHHHCCEEEHHHHHHHHH KAIEDGVPEERIASSLNVDVAYLRRKTAILNGICPEVVELLQDKHVPINTFDQLKKMLPI HHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHCCH RQIEAAQLMIAMNKYSINYAKSLVSATPASQLINQKGAKRINGLTDEQIALMEEESAKLD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH REFRQIERSYGSDHLDLVVINGFLDRLLGNNRIVRYLTLNYPELQAEFQRVTDSQKSAG HHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA