| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310233
Identifier: 83310233
GI number: 83310233
Start: 1212016
End: 1212972
Strand: Reverse
Name: 83310233
Synonym: amb1134
Alternate gene names: NA
Gene position: 1212972-1212016 (Counterclockwise)
Preceding gene: 83310234
Following gene: 83310232
Centisome position: 24.42
GC content: 60.4
Gene sequence:
>957_bases TTGCGCATCTGGTCAGAGGCGACACAGGTCGATCCCTCTCTCCCGCAGCGGACATGTTTCGTCCTGGTGACCACCGGGGT GACGCCAGAGGGACAGGCCGCCGCTAAGCTGCGGTCGCTCCACCTTTGTACACGCGATCCTGTCGGAGCCGCCGATACCC TGACCAAAGTTGCCGAAGGCGGGAGGAACGCCGCGCTCCTGCCGGCCTACTCAGCCTTCCTGGCTTTGACGCCGACAATG CGGATCGCCCTGCTCAGTGCCGTCGAGGTGCTTGACGGTCACGCAACCCTTGCCGATCTGAACCAAGTCATTGAGGACGG TCCTCTCCGCATTATTGCCCCTCGCGGCAAGGCTGCCCAAGCCCGGGAACTGCTGGAAGGATGGTGGTGGCCACGCATCT GCACGGCACTGATGGAAAAGCCGTCTGCACCGATCTCGATCCTGGACCTGGAAGCCAAGCTTGACGACATCCGCGACCAG ATGAAGCGGGACGCGCTGGTGGCTGATTTTGAGCATGCTGATCTGCCCGACACCCACGAAGCCGAGTACGAAGGGCGCCC ATTCGTTCGTCAGCTGAAAGCAATCGGTGTCGGCGGCAATCGCATCCAATTCGCCAAGCGAGATTTTTACCGAGCCTTTG CCCAGAGATCGAAATGGGTCCGGGAGCATGTGGTTCTCGACGGCGAGATCACCCACTTCGAGGCCACTCTGATCGAGGAA TGGCAGCCCCGATTCGAAAGAATGCGGGAACGGCATGCTGGGGAGCCGACCGATAGCACCACGCTTCGGCATGCCGGGCA GGATCTTTACCAATGGGTTGAAAGCGATACCCACTTTCCGTTTCGCGCCCAGGTTCATCGATTCCTGAATGTTGGCTCTT ATCACATGCTGGCCAACGAGCTGAAGGTGGGTTGGCACCGGGATTTCGCCGACCTGTGCAAGGATGAGGACGGCTGA
Upstream 100 bases:
>100_bases GTTCGAGATCAACGGAACCCCGCTCGAACTCCTCCAGACCAAGCACCATTTGGATCGGGCGGCAAGCCTGTCCGACTACA GTGTTGATCTCTGGAAGACA
Downstream 100 bases:
>100_bases AATGGCGGAGGCGCGCTCCCTTCTGCCTTGGCACAATCGCCCTTCCGAGGAGGCGGCGCTGCTCAACCCGGCCTTCTGCG GGGAATTGATTGCGCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRIWSEATQVDPSLPQRTCFVLVTTGVTPEGQAAAKLRSLHLCTRDPVGAADTLTKVAEGGRNAALLPAYSAFLALTPTM RIALLSAVEVLDGHATLADLNQVIEDGPLRIIAPRGKAAQARELLEGWWWPRICTALMEKPSAPISILDLEAKLDDIRDQ MKRDALVADFEHADLPDTHEAEYEGRPFVRQLKAIGVGGNRIQFAKRDFYRAFAQRSKWVREHVVLDGEITHFEATLIEE WQPRFERMRERHAGEPTDSTTLRHAGQDLYQWVESDTHFPFRAQVHRFLNVGSYHMLANELKVGWHRDFADLCKDEDG
Sequences:
>Translated_318_residues MRIWSEATQVDPSLPQRTCFVLVTTGVTPEGQAAAKLRSLHLCTRDPVGAADTLTKVAEGGRNAALLPAYSAFLALTPTM RIALLSAVEVLDGHATLADLNQVIEDGPLRIIAPRGKAAQARELLEGWWWPRICTALMEKPSAPISILDLEAKLDDIRDQ MKRDALVADFEHADLPDTHEAEYEGRPFVRQLKAIGVGGNRIQFAKRDFYRAFAQRSKWVREHVVLDGEITHFEATLIEE WQPRFERMRERHAGEPTDSTTLRHAGQDLYQWVESDTHFPFRAQVHRFLNVGSYHMLANELKVGWHRDFADLCKDEDG >Mature_318_residues MRIWSEATQVDPSLPQRTCFVLVTTGVTPEGQAAAKLRSLHLCTRDPVGAADTLTKVAEGGRNAALLPAYSAFLALTPTM RIALLSAVEVLDGHATLADLNQVIEDGPLRIIAPRGKAAQARELLEGWWWPRICTALMEKPSAPISILDLEAKLDDIRDQ MKRDALVADFEHADLPDTHEAEYEGRPFVRQLKAIGVGGNRIQFAKRDFYRAFAQRSKWVREHVVLDGEITHFEATLIEE WQPRFERMRERHAGEPTDSTTLRHAGQDLYQWVESDTHFPFRAQVHRFLNVGSYHMLANELKVGWHRDFADLCKDEDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35927; Mature: 35927
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIWSEATQVDPSLPQRTCFVLVTTGVTPEGQAAAKLRSLHLCTRDPVGAADTLTKVAEG CCCCCCHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC GRNAALLPAYSAFLALTPTMRIALLSAVEVLDGHATLADLNQVIEDGPLRIIAPRGKAAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHH ARELLEGWWWPRICTALMEKPSAPISILDLEAKLDDIRDQMKRDALVADFEHADLPDTHE HHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AEYEGRPFVRQLKAIGVGGNRIQFAKRDFYRAFAQRSKWVREHVVLDGEITHFEATLIEE CCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH WQPRFERMRERHAGEPTDSTTLRHAGQDLYQWVESDTHFPFRAQVHRFLNVGSYHMLANE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH LKVGWHRDFADLCKDEDG HHCCCCCCHHHHCCCCCC >Mature Secondary Structure MRIWSEATQVDPSLPQRTCFVLVTTGVTPEGQAAAKLRSLHLCTRDPVGAADTLTKVAEG CCCCCCHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC GRNAALLPAYSAFLALTPTMRIALLSAVEVLDGHATLADLNQVIEDGPLRIIAPRGKAAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCHHH ARELLEGWWWPRICTALMEKPSAPISILDLEAKLDDIRDQMKRDALVADFEHADLPDTHE HHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AEYEGRPFVRQLKAIGVGGNRIQFAKRDFYRAFAQRSKWVREHVVLDGEITHFEATLIEE CCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH WQPRFERMRERHAGEPTDSTTLRHAGQDLYQWVESDTHFPFRAQVHRFLNVGSYHMLANE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH LKVGWHRDFADLCKDEDG HHCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA