Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310228

Identifier: 83310228

GI number: 83310228

Start: 1207550

End: 1207939

Strand: Reverse

Name: 83310228

Synonym: amb1129

Alternate gene names: NA

Gene position: 1207939-1207550 (Counterclockwise)

Preceding gene: 83310231

Following gene: 83310226

Centisome position: 24.32

GC content: 60.26

Gene sequence:

>390_bases
ATGGCGGGACAGCGTGGCGTATGGATCAAAGGGCTGACCAAGGATGACAAGGCGGCAACCTCGCGCACCTGCGAGCGGTT
CATCGCCGAGGTGCTGATCCCCCGGTTTCTGCCCGAGATCCGTCCCACGGAATTCAACTACCCCATCGCGATCACCGGCA
AATGGCGCGGCGACAAGTACAGCTTCATCCAGCGTTACCGTTCGGGCTTTGCCGACAACGCGGGTGAGGTGTTTGATTCC
GCCTTTGCCCGCCTCGACCATGTCAGCGGTGACCGCTTCGATCTTATGTGGCACCGCCATACCGGACAGTGGCTGTGCTT
CCGGGCGGGAGTATCTCTTGCCGAGGCTTTACAGCTGATGGAGGCTGAGGGGCTGTTGCAACCGAATTAA

Upstream 100 bases:

>100_bases
ATGGGGCCTCCAGTCGCTGACGTCTGGAGGGGCGTCGGCTTGCGGTAGCGCAATTTCTGTCCCTTTGCCATGATGCGCGT
GCAGGCAAGGAGAGGGCACC

Downstream 100 bases:

>100_bases
CCAAAGAGCCGCCGCACCGTTCAAGTTAATGATTTTTATTTATGGTTCGCAGACAGGTTGCTTCGGTTGCAGTAGGTCAG
CATTTCACTCAAAACCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MAGQRGVWIKGLTKDDKAATSRTCERFIAEVLIPRFLPEIRPTEFNYPIAITGKWRGDKYSFIQRYRSGFADNAGEVFDS
AFARLDHVSGDRFDLMWHRHTGQWLCFRAGVSLAEALQLMEAEGLLQPN

Sequences:

>Translated_129_residues
MAGQRGVWIKGLTKDDKAATSRTCERFIAEVLIPRFLPEIRPTEFNYPIAITGKWRGDKYSFIQRYRSGFADNAGEVFDS
AFARLDHVSGDRFDLMWHRHTGQWLCFRAGVSLAEALQLMEAEGLLQPN
>Mature_128_residues
AGQRGVWIKGLTKDDKAATSRTCERFIAEVLIPRFLPEIRPTEFNYPIAITGKWRGDKYSFIQRYRSGFADNAGEVFDSA
FARLDHVSGDRFDLMWHRHTGQWLCFRAGVSLAEALQLMEAEGLLQPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14739; Mature: 14608

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQRGVWIKGLTKDDKAATSRTCERFIAEVLIPRFLPEIRPTEFNYPIAITGKWRGDKY
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHH
SFIQRYRSGFADNAGEVFDSAFARLDHVSGDRFDLMWHRHTGQWLCFRAGVSLAEALQLM
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHCCCHHHHHHHH
EAEGLLQPN
HHCCCCCCC
>Mature Secondary Structure 
AGQRGVWIKGLTKDDKAATSRTCERFIAEVLIPRFLPEIRPTEFNYPIAITGKWRGDKY
CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHH
SFIQRYRSGFADNAGEVFDSAFARLDHVSGDRFDLMWHRHTGQWLCFRAGVSLAEALQLM
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHCCCHHHHHHHH
EAEGLLQPN
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA