| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310129
Identifier: 83310129
GI number: 83310129
Start: 1091541
End: 1092350
Strand: Reverse
Name: 83310129
Synonym: amb1030
Alternate gene names: NA
Gene position: 1092350-1091541 (Counterclockwise)
Preceding gene: 83310130
Following gene: 83310126
Centisome position: 21.99
GC content: 59.88
Gene sequence:
>810_bases GTGCCAGCCCTTGAGGGTATCTGCAAGAGGTTCTCTGGCTTTGGCCTCAGTGCCTTGATCCGCGAGCAAGCCGTGGCACT TGAAGTCTTGGTTGAAATCGGCGGCCCAGAGGCGGCGACTGCGGTGGAGCGGATCATCACACGAGATATGGTTCAGGGGC CTGGGTTGGTACTTGCTGTTGCCGCAGCAGCTCGAACCGGCGTCACCCTGCCTGCCGCCGTGACGATGCGGTTGCTGCGC CATGACGAACCCGATGTCCGTGCCGATGCCTGTCGCAGCGCACGCTTAGATCCTGATGTTGTCGCTATCTTGTTGGATCT TCAAGATGATCTGCACCCCAGCGTTCGCATTGCCGCGGCCTGCGCCCTTGGGCGATTTGGGAAGGTTGATGCCCTAGAGG CGCTGAGCGAAGCGTTAGCATCGGCGCCCAACCACGAAGTAATCGATGCCTTAGCCGACATTGCCGACGACGACGCCGTC GTGCTGCTTGGTCGGGTGGCACAAGATCGGCCCGACTTGGCCGAAGCAGTGTTATCGGCTCTTGATGAGTGTGGCTCAGC GTTGTCCGCAAAGGTGTCCGATCGGGTTCGGAGATTGTCGAGAGCTACAACCGCCATGATTGGCCCGCACGATATTGTCG TTGAGATCGATGAAATCCCCTATATCGGCAGATGCGAGTTGAAAGGGGAGACGGTGGTGGTTACCTCCGAGTTTGGCTCC AAGGCGCTGGAGGTTGGCGAATTACCGCCTGACGTCGTGGCCAAGCGCCTGCTGGCTGCACTCGTTCGTGAGGCCGAGGG CCATGTCTGA
Upstream 100 bases:
>100_bases GTTACCAGATCAAGAATTGGTGGCAGGAATCGCAACCGCTGGGATTGCGGAAATCTTCGCCCGGATGACCGAATGTGGGC GGCGTAAATTGACGGCGGCT
Downstream 100 bases:
>100_bases CCTCCGGCCCCGTCCCTCCCGTGTTCTTCAGCGGCGCGCCCGCCGTGCGCGGCTGATCCTGATGGCGATCCTCGTCATTG GGCTCGGCGTGGCCTACTAT
Product: HEAT repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MPALEGICKRFSGFGLSALIREQAVALEVLVEIGGPEAATAVERIITRDMVQGPGLVLAVAAAARTGVTLPAAVTMRLLR HDEPDVRADACRSARLDPDVVAILLDLQDDLHPSVRIAAACALGRFGKVDALEALSEALASAPNHEVIDALADIADDDAV VLLGRVAQDRPDLAEAVLSALDECGSALSAKVSDRVRRLSRATTAMIGPHDIVVEIDEIPYIGRCELKGETVVVTSEFGS KALEVGELPPDVVAKRLLAALVREAEGHV
Sequences:
>Translated_269_residues MPALEGICKRFSGFGLSALIREQAVALEVLVEIGGPEAATAVERIITRDMVQGPGLVLAVAAAARTGVTLPAAVTMRLLR HDEPDVRADACRSARLDPDVVAILLDLQDDLHPSVRIAAACALGRFGKVDALEALSEALASAPNHEVIDALADIADDDAV VLLGRVAQDRPDLAEAVLSALDECGSALSAKVSDRVRRLSRATTAMIGPHDIVVEIDEIPYIGRCELKGETVVVTSEFGS KALEVGELPPDVVAKRLLAALVREAEGHV >Mature_268_residues PALEGICKRFSGFGLSALIREQAVALEVLVEIGGPEAATAVERIITRDMVQGPGLVLAVAAAARTGVTLPAAVTMRLLRH DEPDVRADACRSARLDPDVVAILLDLQDDLHPSVRIAAACALGRFGKVDALEALSEALASAPNHEVIDALADIADDDAVV LLGRVAQDRPDLAEAVLSALDECGSALSAKVSDRVRRLSRATTAMIGPHDIVVEIDEIPYIGRCELKGETVVVTSEFGSK ALEVGELPPDVVAKRLLAALVREAEGHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28266; Mature: 28135
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALEGICKRFSGFGLSALIREQAVALEVLVEIGGPEAATAVERIITRDMVQGPGLVLAV CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH AAAARTGVTLPAAVTMRLLRHDEPDVRADACRSARLDPDVVAILLDLQDDLHPSVRIAAA HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH CALGRFGKVDALEALSEALASAPNHEVIDALADIADDDAVVLLGRVAQDRPDLAEAVLSA HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHH LDECGSALSAKVSDRVRRLSRATTAMIGPHDIVVEIDEIPYIGRCELKGETVVVTSEFGS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEECCCCC KALEVGELPPDVVAKRLLAALVREAEGHV HHHHCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PALEGICKRFSGFGLSALIREQAVALEVLVEIGGPEAATAVERIITRDMVQGPGLVLAV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH AAAARTGVTLPAAVTMRLLRHDEPDVRADACRSARLDPDVVAILLDLQDDLHPSVRIAAA HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH CALGRFGKVDALEALSEALASAPNHEVIDALADIADDDAVVLLGRVAQDRPDLAEAVLSA HHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHH LDECGSALSAKVSDRVRRLSRATTAMIGPHDIVVEIDEIPYIGRCELKGETVVVTSEFGS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEECCCCC KALEVGELPPDVVAKRLLAALVREAEGHV HHHHCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA