| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310083
Identifier: 83310083
GI number: 83310083
Start: 1044690
End: 1045256
Strand: Reverse
Name: 83310083
Synonym: amb0984
Alternate gene names: NA
Gene position: 1045256-1044690 (Counterclockwise)
Preceding gene: 83310084
Following gene: 83310081
Centisome position: 21.04
GC content: 64.55
Gene sequence:
>567_bases ATGGCGCATCCTTCGATACTGTCCGTAGCGCTGGCGAACCTGCAGAAATCCCATGAATTTCTGCTGAAAATTCTGGACGC CTGCGGCAACATCCCCGGAGCCCCCGGCGCGGCGTCCGATCAGGAAATGATGGCCGCTATCGCCCATCTGGCGCATTTGA CCGAATCCGTGATTCAGGAGGGCGAATTTGCCCGCGAGAACGGCGGCGACTTCGTGGCCGCCGACATCTTTTCCGAAACA GCCCGCGACACCCAGGCTTCCCTTGTCCAGGCGCCCCCCGCCGACAATAAAATGCTCCGCCTCCAGGTCATCTTGCAGAT ATGCCTGGAACAAAGCGAACGGAACTGGCTCCAGGCCAAGCGGCTGAAATCCGAAAACGCCGCCCTGCGGCGCGGCATGA AGCAGGTCGCCGCCGATGTGGCCGCCGCCCGCTCGATGCTGCCGCCGGTCGCTGCCGCCGCCCCCCGATCAGCCCCGGTC CCCATCACGGCGGCAAGACCGTCGCCCGCGGCAACGCCCGTGACGGTGACGCGGCTGGCCGGACAGCAGAAACTTCGGCT GAAATAG
Upstream 100 bases:
>100_bases AAGCCGGGCCGTCGTGCGCAAGGACGGCCCGGATGGGATTGCCGATCCCGACGGGTTCAGACAGAATGGGCCTGTCCGCG TCAGCACAAGGTCCTGAGAG
Downstream 100 bases:
>100_bases GGGCTCGGCGCCGAACTCGCCGACCGCCCCGCCCCCCCACGGCCCTGATCAAGCCTTCTCCCCCCCCCTCTCCCCACGCG AACGCAAAAGATCGGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAHPSILSVALANLQKSHEFLLKILDACGNIPGAPGAASDQEMMAAIAHLAHLTESVIQEGEFARENGGDFVAADIFSET ARDTQASLVQAPPADNKMLRLQVILQICLEQSERNWLQAKRLKSENAALRRGMKQVAADVAAARSMLPPVAAAAPRSAPV PITAARPSPAATPVTVTRLAGQQKLRLK
Sequences:
>Translated_188_residues MAHPSILSVALANLQKSHEFLLKILDACGNIPGAPGAASDQEMMAAIAHLAHLTESVIQEGEFARENGGDFVAADIFSET ARDTQASLVQAPPADNKMLRLQVILQICLEQSERNWLQAKRLKSENAALRRGMKQVAADVAAARSMLPPVAAAAPRSAPV PITAARPSPAATPVTVTRLAGQQKLRLK >Mature_187_residues AHPSILSVALANLQKSHEFLLKILDACGNIPGAPGAASDQEMMAAIAHLAHLTESVIQEGEFARENGGDFVAADIFSETA RDTQASLVQAPPADNKMLRLQVILQICLEQSERNWLQAKRLKSENAALRRGMKQVAADVAAARSMLPPVAAAAPRSAPVP ITAARPSPAATPVTVTRLAGQQKLRLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19956; Mature: 19825
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPSILSVALANLQKSHEFLLKILDACGNIPGAPGAASDQEMMAAIAHLAHLTESVIQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GEFARENGGDFVAADIFSETARDTQASLVQAPPADNKMLRLQVILQICLEQSERNWLQAK CCHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLKSENAALRRGMKQVAADVAAARSMLPPVAAAAPRSAPVPITAARPSPAATPVTVTRLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCCHHHHHHC GQQKLRLK CCHHCCCC >Mature Secondary Structure AHPSILSVALANLQKSHEFLLKILDACGNIPGAPGAASDQEMMAAIAHLAHLTESVIQE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GEFARENGGDFVAADIFSETARDTQASLVQAPPADNKMLRLQVILQICLEQSERNWLQAK CCHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RLKSENAALRRGMKQVAADVAAARSMLPPVAAAAPRSAPVPITAARPSPAATPVTVTRLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEECCCCCCCCCHHHHHHC GQQKLRLK CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA