| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309945
Identifier: 83309945
GI number: 83309945
Start: 905211
End: 907106
Strand: Reverse
Name: 83309945
Synonym: amb0846
Alternate gene names: NA
Gene position: 907106-905211 (Counterclockwise)
Preceding gene: 83309950
Following gene: 83309938
Centisome position: 18.26
GC content: 68.35
Gene sequence:
>1896_bases GTGCTGGTGGCCATGGGGGCGCTTGCCGAATCCGCCCCCGCGGCCGAACCGCCCAAGCTGCTGCCCGATCAGTCGTTCAT CGACACCCGCTATATGGGGCGGCACGCCGGCCAGGACCTGCCGCCGACCATCCCGCTGACCGACCTGCCGGTGGCCGAGC CGCTGATGCCGGCCAAGACCGCTTGGCCCACCGAGTTCTTCGCCCAACGCCGCGCCGTGGCGGCGGCGGGCAATGTTGCA CTTACCGGCGGCTTCCAGGGCAACGGCGTGGTGTCCACCGAGGCGGGACTGGCCAATACCGAGCTGGGGGACGCATCCCT CTGGGCCGGTGCGCGGCACGACCACGTCAAGCCCTATGAAGACGGTGCCGGACAGCGGGTGAATTACGGCTACGACCGCA TCAACACCCAATTGGCCGCCGCCTGGCGCCCCGCGCCCAAAAGCCGCCTGTCCGGCTTCGTCATGCGCGACGCCTTCTCC CACCACCGCATCCCCAATTACGGCATCGACGCTACCCGGCTGGACCGCTACCTCGCCTCGACGGTGTTCGAGCACGCGCC GACCGACTCGGCGCTGAACCGGGTTGAGGCCGGACTGGTATTCGATGCGCTGAGCTACGATGCCGACAACACCTCCCTGA GGGACCGGGGCAGCCTGGGCCTCAAATACAACGGCCTGTGGACCACCGCGCGCGGGCTGGTGCGCGGCGAGTTCGCCACC GGCTCGTTCCGCAATACGGTGACGGCGGATTTCGGCCTGTTGAAGTACAACATTGACATCGATGCCCTTTACCCCGCCCA GGGGCAGGCCGTCCATCGCATGCCCGATGTCCAAACGCTGCAAGGCGGGCTGACCTTCGCCACCGCCACCAAGCTGTCGC CGCAGGATTCCCTCAGCGCCGCCCTGCGCCTGGACGCCATCCACTCGGACCCCAACGAGCGCAGCCAATTGCCACCGGTC TCCGGCTCGGGGGCCTCGTCGTTCCAGGTTACGCCACAGCAATTGTGGAACCGCTATTACGGCGGCAACGTCGATTCCAA CCCGACCAATCTCAATGTCAGCGGCCGGATTCTGGTGGCCCACGACACCGAGGACCGTACCGGGCGCCTGCATGCCGATC TGCGCCGGGCCGTGCGCAGCCCGGATGCGGGCGAGCGCTTCTATGCCAATTCCGGCCCCACCGCCCTCACCCAGGTGGGC AACCCGCAACTGAATCCCGAGGCCCATCATCGCTTCGAGCTGGGAGCGCGTCAGGACGGCGGCGGCTTCAAGGGCAATTT CGCGCCGGGCAATCCGACGGGGTCGTGGCGGGTGGCGGTCTCGGGCTATGGCGACCGCGTGGTGGATTTCATCACCGCCG ACCGGGCCAGGGGCCAGACCGGCATCGCCAGAAGCGACGGCGCCATCATCTACCGCAATGTGGACGCCTATCTGGCGGGA ACCGCCCTGGAAGCCTGGTGGCAGGTCTCGGAGGGCTGGGGGGCGCGAGCCAAGCTGTCGTGGACACGCGGCGAGAACCT GACCGATTCGCGCCCTCTCTACCAGATCCCGCCGCTGGACGGTGAGATGGTGATCGAGCACCGGCGCGAACTGGCCCCCG ACACCGTGGGATCGGCGGGCGCACGCCTCAGCTTCGCCGCCAGCCAGAACCGAATCGACGCCTATTCCTCCACGGGATCG GCCGAGGACACGGCGGGCGGCACCGCCGGCTGGGCGCTGCTTGACCTGTTCGCCGGCGTCGCACTGGGGGAACGCGCCGC CCTCACCGCCGGCATCGCCAACGTGCTTGACAAGCACTATCACCTGCACGTCAACCCGCTGCCGCAAAGCCCCACGACCA AGCTGCAATGGGCGCCGGGGCGCAGTGCCTTCGTTCAGGCCACCGTCAGCTTCTGA
Upstream 100 bases:
>100_bases GCAACCGGATTGACTTGCCTTTGGGTGTCCAATCCCATTAGTTCTAGAAAGCATGAGACGGGGGCGTCATCCAAGACAGA TTTTGCTGCGCGGTCTGCCG
Downstream 100 bases:
>100_bases GAACGCCGCGGGTCACGCCGTGGGAGTGGCCGCGTCCAGCAGCATGGCGCGGAACAGGGCCAGCAGCGACTGGTCGATCT CGCCGCCCATGCGCTCGGTC
Product: Outer membrane receptor protein
Products: NA
Alternate protein names: NB-Dependent Receptor; Outer Membrane Copper Receptor OprC; Outer Membrane Protein C; NB-Dependent Receptor Domain-Containing Protein; NB Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Outer Membrane Copper Receptor; Outer Membrane Protein OprC Complement; N-B Dependent Receptor; NosA Protein; Membrane Receptor Protein; Outer Membrane Protein OprC
Number of amino acids: Translated: 631; Mature: 631
Protein sequence:
>631_residues MLVAMGALAESAPAAEPPKLLPDQSFIDTRYMGRHAGQDLPPTIPLTDLPVAEPLMPAKTAWPTEFFAQRRAVAAAGNVA LTGGFQGNGVVSTEAGLANTELGDASLWAGARHDHVKPYEDGAGQRVNYGYDRINTQLAAAWRPAPKSRLSGFVMRDAFS HHRIPNYGIDATRLDRYLASTVFEHAPTDSALNRVEAGLVFDALSYDADNTSLRDRGSLGLKYNGLWTTARGLVRGEFAT GSFRNTVTADFGLLKYNIDIDALYPAQGQAVHRMPDVQTLQGGLTFATATKLSPQDSLSAALRLDAIHSDPNERSQLPPV SGSGASSFQVTPQQLWNRYYGGNVDSNPTNLNVSGRILVAHDTEDRTGRLHADLRRAVRSPDAGERFYANSGPTALTQVG NPQLNPEAHHRFELGARQDGGGFKGNFAPGNPTGSWRVAVSGYGDRVVDFITADRARGQTGIARSDGAIIYRNVDAYLAG TALEAWWQVSEGWGARAKLSWTRGENLTDSRPLYQIPPLDGEMVIEHRRELAPDTVGSAGARLSFAASQNRIDAYSSTGS AEDTAGGTAGWALLDLFAGVALGERAALTAGIANVLDKHYHLHVNPLPQSPTTKLQWAPGRSAFVQATVSF
Sequences:
>Translated_631_residues MLVAMGALAESAPAAEPPKLLPDQSFIDTRYMGRHAGQDLPPTIPLTDLPVAEPLMPAKTAWPTEFFAQRRAVAAAGNVA LTGGFQGNGVVSTEAGLANTELGDASLWAGARHDHVKPYEDGAGQRVNYGYDRINTQLAAAWRPAPKSRLSGFVMRDAFS HHRIPNYGIDATRLDRYLASTVFEHAPTDSALNRVEAGLVFDALSYDADNTSLRDRGSLGLKYNGLWTTARGLVRGEFAT GSFRNTVTADFGLLKYNIDIDALYPAQGQAVHRMPDVQTLQGGLTFATATKLSPQDSLSAALRLDAIHSDPNERSQLPPV SGSGASSFQVTPQQLWNRYYGGNVDSNPTNLNVSGRILVAHDTEDRTGRLHADLRRAVRSPDAGERFYANSGPTALTQVG NPQLNPEAHHRFELGARQDGGGFKGNFAPGNPTGSWRVAVSGYGDRVVDFITADRARGQTGIARSDGAIIYRNVDAYLAG TALEAWWQVSEGWGARAKLSWTRGENLTDSRPLYQIPPLDGEMVIEHRRELAPDTVGSAGARLSFAASQNRIDAYSSTGS AEDTAGGTAGWALLDLFAGVALGERAALTAGIANVLDKHYHLHVNPLPQSPTTKLQWAPGRSAFVQATVSF >Mature_631_residues MLVAMGALAESAPAAEPPKLLPDQSFIDTRYMGRHAGQDLPPTIPLTDLPVAEPLMPAKTAWPTEFFAQRRAVAAAGNVA LTGGFQGNGVVSTEAGLANTELGDASLWAGARHDHVKPYEDGAGQRVNYGYDRINTQLAAAWRPAPKSRLSGFVMRDAFS HHRIPNYGIDATRLDRYLASTVFEHAPTDSALNRVEAGLVFDALSYDADNTSLRDRGSLGLKYNGLWTTARGLVRGEFAT GSFRNTVTADFGLLKYNIDIDALYPAQGQAVHRMPDVQTLQGGLTFATATKLSPQDSLSAALRLDAIHSDPNERSQLPPV SGSGASSFQVTPQQLWNRYYGGNVDSNPTNLNVSGRILVAHDTEDRTGRLHADLRRAVRSPDAGERFYANSGPTALTQVG NPQLNPEAHHRFELGARQDGGGFKGNFAPGNPTGSWRVAVSGYGDRVVDFITADRARGQTGIARSDGAIIYRNVDAYLAG TALEAWWQVSEGWGARAKLSWTRGENLTDSRPLYQIPPLDGEMVIEHRRELAPDTVGSAGARLSFAASQNRIDAYSSTGS AEDTAGGTAGWALLDLFAGVALGERAALTAGIANVLDKHYHLHVNPLPQSPTTKLQWAPGRSAFVQATVSF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67739; Mature: 67739
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAMGALAESAPAAEPPKLLPDQSFIDTRYMGRHAGQDLPPTIPLTDLPVAEPLMPAKT CEEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AWPTEFFAQRRAVAAAGNVALTGGFQGNGVVSTEAGLANTELGDASLWAGARHDHVKPYE CCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCC DGAGQRVNYGYDRINTQLAAAWRPAPKSRLSGFVMRDAFSHHRIPNYGIDATRLDRYLAS CCCCCEEECCHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH TVFEHAPTDSALNRVEAGLVFDALSYDADNTSLRDRGSLGLKYNGLWTTARGLVRGEFAT HHHHCCCCHHHHHHHHHCEEEEHHHCCCCCCCCCCCCCCCEEECCEEHHHCCCEEEEECC GSFRNTVTADFGLLKYNIDIDALYPAQGQAVHRMPDVQTLQGGLTFATATKLSPQDSLSA CCCCCCEEECCEEEEEECEEEEECCCCCCHHHCCCCHHHHCCCEEEEEEECCCCHHHHHH ALRLDAIHSDPNERSQLPPVSGSGASSFQVTPQQLWNRYYGGNVDSNPTNLNVSGRILVA HEEEEHHCCCCCCHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCEEEECEEEEEE HDTEDRTGRLHADLRRAVRSPDAGERFYANSGPTALTQVGNPQLNPEAHHRFELGARQDG ECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCC GGFKGNFAPGNPTGSWRVAVSGYGDRVVDFITADRARGQTGIARSDGAIIYRNVDAYLAG CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCEEEEECCCHHHHH TALEAWWQVSEGWGARAKLSWTRGENLTDSRPLYQIPPLDGEMVIEHRRELAPDTVGSAG HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCC ARLSFAASQNRIDAYSSTGSAEDTAGGTAGWALLDLFAGVALGERAALTAGIANVLDKHY CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE HLHVNPLPQSPTTKLQWAPGRSAFVQATVSF EEEECCCCCCCCCEEEECCCCCEEEEEEECC >Mature Secondary Structure MLVAMGALAESAPAAEPPKLLPDQSFIDTRYMGRHAGQDLPPTIPLTDLPVAEPLMPAKT CEEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC AWPTEFFAQRRAVAAAGNVALTGGFQGNGVVSTEAGLANTELGDASLWAGARHDHVKPYE CCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCC DGAGQRVNYGYDRINTQLAAAWRPAPKSRLSGFVMRDAFSHHRIPNYGIDATRLDRYLAS CCCCCEEECCHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH TVFEHAPTDSALNRVEAGLVFDALSYDADNTSLRDRGSLGLKYNGLWTTARGLVRGEFAT HHHHCCCCHHHHHHHHHCEEEEHHHCCCCCCCCCCCCCCCEEECCEEHHHCCCEEEEECC GSFRNTVTADFGLLKYNIDIDALYPAQGQAVHRMPDVQTLQGGLTFATATKLSPQDSLSA CCCCCCEEECCEEEEEECEEEEECCCCCCHHHCCCCHHHHCCCEEEEEEECCCCHHHHHH ALRLDAIHSDPNERSQLPPVSGSGASSFQVTPQQLWNRYYGGNVDSNPTNLNVSGRILVA HEEEEHHCCCCCCHHCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCEEEECEEEEEE HDTEDRTGRLHADLRRAVRSPDAGERFYANSGPTALTQVGNPQLNPEAHHRFELGARQDG ECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCC GGFKGNFAPGNPTGSWRVAVSGYGDRVVDFITADRARGQTGIARSDGAIIYRNVDAYLAG CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEEECCCEEEEECCCHHHHH TALEAWWQVSEGWGARAKLSWTRGENLTDSRPLYQIPPLDGEMVIEHRRELAPDTVGSAG HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCC ARLSFAASQNRIDAYSSTGSAEDTAGGTAGWALLDLFAGVALGERAALTAGIANVLDKHY CEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE HLHVNPLPQSPTTKLQWAPGRSAFVQATVSF EEEECCCCCCCCCEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA