| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309916
Identifier: 83309916
GI number: 83309916
Start: 874332
End: 875303
Strand: Reverse
Name: 83309916
Synonym: amb0817
Alternate gene names: NA
Gene position: 875303-874332 (Counterclockwise)
Preceding gene: 83309917
Following gene: 83309915
Centisome position: 17.62
GC content: 65.23
Gene sequence:
>972_bases ATGAGCGAGTTGCTGGCACGCAATGCCGATTGCATCGTCTGGCTGGCCCGCTACATGGAGCGGGCCGAGAATCTGGCCCG CATCCTGGGCGTGGCCGAGACCTTCGCCCGCGACCGCGCCGGGCGCAACTGGCTGGCGGTGGTGCAGATCAACGCCGACG AGGAACGCTTCTTCGCCCGCCATCGGGTCGCCGATGCGCGCACGGTGCCGCACTTCTACATCCTGGACCCGGACAACCCC AATTCCATCCTGTCCTCGGTCAAGGCGGCGCGCGAGAATGCGCGGACGCTGCGCCCCATGATCTCCATCGAGATGTGGCG CCAGATCAACCGCATGAACACCTGGATGGGCGGCCTGTCGGCCAATGCCGTGGCGCCGGCCAATCTCGTCGCCCTGTGCG AGGAGATCAAGGAGGCCTGCCAGTTGCACGTGGGCATCACCGAAGGCACCTTCTACCGCGATCAGGCCCACTACTTCTAT CACCTGGGCAAGTCCATCGAGCGCGCCGACCAGACCACCCGCCTGCTGGACATCAAGTACCATACCCTGCTGCCCCGGCC CGAGGACGTGGGCTCGGCGCTGGATATCAGCCACTGGAACGCCCTGCTGAAGGCAGTGGCCGGCTATCAGGCGTCGCGCC GGGTGATGGCGGGCAAGATCACGCCGCGTTCGGTGGCGGCCTTCCTGCTGTTCTCGGATTCCTTCCCGCGCTCGGTGATT CTGTGCGTGCGCCAGATGGACTGGCTGCTGACCCAGTTGCGCTCGCGCTACAACCTGCGGGGCGGTGTCCGGGCGCTGGA ACTGCTGGACGGGCTGCGCGCCGCCCTGACCGATCACACCATCGATCAGGTCATCGACCACGGCCTGCACGAGTTCATCG ACTGGGTGCAGGCCCAATTGATGCTGATCTTCGCCGAAATTCAGGAAAGCTTTTGCGTCTCGCGCCAGCCTCAGGCCAGC CAGAGTCAATAA
Upstream 100 bases:
>100_bases GCGGCCTGACCCGCGTGGCCATGAAGGAAGGCTCGCTGGTGGTCAACTCGTCCCAGGGGGGCGGTTCCAAGGATACCTGG GTTCTGGCGGGAGAAGGCCA
Downstream 100 bases:
>100_bases TTTGCTTCTATATTAGTAATTAACTTGGTAAGCATGTGGCGACTTCCCCTGCACGGATGGGCGCCCCATGACCGGACCCT TATCGCATCTTCGCGTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSELLARNADCIVWLARYMERAENLARILGVAETFARDRAGRNWLAVVQINADEERFFARHRVADARTVPHFYILDPDNP NSILSSVKAARENARTLRPMISIEMWRQINRMNTWMGGLSANAVAPANLVALCEEIKEACQLHVGITEGTFYRDQAHYFY HLGKSIERADQTTRLLDIKYHTLLPRPEDVGSALDISHWNALLKAVAGYQASRRVMAGKITPRSVAAFLLFSDSFPRSVI LCVRQMDWLLTQLRSRYNLRGGVRALELLDGLRAALTDHTIDQVIDHGLHEFIDWVQAQLMLIFAEIQESFCVSRQPQAS QSQ
Sequences:
>Translated_323_residues MSELLARNADCIVWLARYMERAENLARILGVAETFARDRAGRNWLAVVQINADEERFFARHRVADARTVPHFYILDPDNP NSILSSVKAARENARTLRPMISIEMWRQINRMNTWMGGLSANAVAPANLVALCEEIKEACQLHVGITEGTFYRDQAHYFY HLGKSIERADQTTRLLDIKYHTLLPRPEDVGSALDISHWNALLKAVAGYQASRRVMAGKITPRSVAAFLLFSDSFPRSVI LCVRQMDWLLTQLRSRYNLRGGVRALELLDGLRAALTDHTIDQVIDHGLHEFIDWVQAQLMLIFAEIQESFCVSRQPQAS QSQ >Mature_322_residues SELLARNADCIVWLARYMERAENLARILGVAETFARDRAGRNWLAVVQINADEERFFARHRVADARTVPHFYILDPDNPN SILSSVKAARENARTLRPMISIEMWRQINRMNTWMGGLSANAVAPANLVALCEEIKEACQLHVGITEGTFYRDQAHYFYH LGKSIERADQTTRLLDIKYHTLLPRPEDVGSALDISHWNALLKAVAGYQASRRVMAGKITPRSVAAFLLFSDSFPRSVIL CVRQMDWLLTQLRSRYNLRGGVRALELLDGLRAALTDHTIDQVIDHGLHEFIDWVQAQLMLIFAEIQESFCVSRQPQASQ SQ
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36761; Mature: 36629
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELLARNADCIVWLARYMERAENLARILGVAETFARDRAGRNWLAVVQINADEERFFAR CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH HRVADARTVPHFYILDPDNPNSILSSVKAARENARTLRPMISIEMWRQINRMNTWMGGLS HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ANAVAPANLVALCEEIKEACQLHVGITEGTFYRDQAHYFYHLGKSIERADQTTRLLDIKY CCCCCHHHHHHHHHHHHHHHHEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHEEEHH HTLLPRPEDVGSALDISHWNALLKAVAGYQASRRVMAGKITPRSVAAFLLFSDSFPRSVI HHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH LCVRQMDWLLTQLRSRYNLRGGVRALELLDGLRAALTDHTIDQVIDHGLHEFIDWVQAQL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLIFAEIQESFCVSRQPQASQSQ HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SELLARNADCIVWLARYMERAENLARILGVAETFARDRAGRNWLAVVQINADEERFFAR CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHH HRVADARTVPHFYILDPDNPNSILSSVKAARENARTLRPMISIEMWRQINRMNTWMGGLS HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ANAVAPANLVALCEEIKEACQLHVGITEGTFYRDQAHYFYHLGKSIERADQTTRLLDIKY CCCCCHHHHHHHHHHHHHHHHEECCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHEEEHH HTLLPRPEDVGSALDISHWNALLKAVAGYQASRRVMAGKITPRSVAAFLLFSDSFPRSVI HHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHH LCVRQMDWLLTQLRSRYNLRGGVRALELLDGLRAALTDHTIDQVIDHGLHEFIDWVQAQL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLIFAEIQESFCVSRQPQASQSQ HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA