| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309856
Identifier: 83309856
GI number: 83309856
Start: 814871
End: 815638
Strand: Reverse
Name: 83309856
Synonym: amb0757
Alternate gene names: NA
Gene position: 815638-814871 (Counterclockwise)
Preceding gene: 83309861
Following gene: 83309854
Centisome position: 16.42
GC content: 72.53
Gene sequence:
>768_bases ATGACCCGGAGCGAAGCCGACCATGTTCTCGATGAAGCGGAGACGCTGTGGCTTTCCGGCGAGAAGCAGCGGGCCCGCGA GTGCTGCCTGCGGGCCCGCCTGCTCTATCACGAGACCGGCGACGTGCGCGGCGAGGCCGATGCCCTGACCCGCATGGGCG ACATCGAGGCCGAGACCGGCCACGGCAACGGCGCCCGCCAGGCCTATGTGGAGGCCCGCCAGCTCTATGCCCGCGGCGGC GACCAGCGCGAGCAGGGCGCCGTCCTGGTGCGCCTCGCCCATCTGGCCCAGCGCGAGGGCGACGAGACCCAGGCTCGCGC CCTCTATCAGTCGGCGCTGGAGGTCTATGACTCGGCCGGCGAGTCCTCGGGCCTGGGCCATGTCCACCGCGCCTTGGGCC ACCTGGACCGCGACGGCGGCGCCCAGGACAAGGCGCTGGACCGTTACCGCGAGGCCCTGGCCTGCTATCGCCGCTCGTCG GACACCCTGGGCGAGGCGGGAACCCTCAAGGCCATGGCGGCGATTCAGCTGGCGCTGGGCCATCCCGACCAGGCCCGGCC CCAGTGCGAGGAGGCCCTGGGCCTGATGCGCGAGGCCGGCAATCTGCTGGGCGAGGCCAAGGCGTCGCGCCTGATGGCCC GCATCCTGGCCGCCGAGGGGCGGCGGGACGAAGCCCGCAAGGCCATGCACGCCGCGGCGAAGATGTTCGCCCGGGCGGGC GACGTGGCTAGCCATGACGAGGCGGAGCAGGAGTCGAAGACCCTATAA
Upstream 100 bases:
>100_bases TTTTATTCCCCCTGATGCCCACATAAAAGGAATATTTGGTAGCGCTCGGATAGAAGTTTACGCTGAACGCGTCACAATTC GGAAAAAGGGGGGGGCCGCC
Downstream 100 bases:
>100_bases GCCGATGGGGGGAAAGGCGCTCTGGCCCTTGACCCGGCGCTCGTAGTCCAGCGCCATGCGGACATTGGGATAGGCCAGAT GATCCCAGGGGATATCGTCC
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTRSEADHVLDEAETLWLSGEKQRARECCLRARLLYHETGDVRGEADALTRMGDIEAETGHGNGARQAYVEARQLYARGG DQREQGAVLVRLAHLAQREGDETQARALYQSALEVYDSAGESSGLGHVHRALGHLDRDGGAQDKALDRYREALACYRRSS DTLGEAGTLKAMAAIQLALGHPDQARPQCEEALGLMREAGNLLGEAKASRLMARILAAEGRRDEARKAMHAAAKMFARAG DVASHDEAEQESKTL
Sequences:
>Translated_255_residues MTRSEADHVLDEAETLWLSGEKQRARECCLRARLLYHETGDVRGEADALTRMGDIEAETGHGNGARQAYVEARQLYARGG DQREQGAVLVRLAHLAQREGDETQARALYQSALEVYDSAGESSGLGHVHRALGHLDRDGGAQDKALDRYREALACYRRSS DTLGEAGTLKAMAAIQLALGHPDQARPQCEEALGLMREAGNLLGEAKASRLMARILAAEGRRDEARKAMHAAAKMFARAG DVASHDEAEQESKTL >Mature_254_residues TRSEADHVLDEAETLWLSGEKQRARECCLRARLLYHETGDVRGEADALTRMGDIEAETGHGNGARQAYVEARQLYARGGD QREQGAVLVRLAHLAQREGDETQARALYQSALEVYDSAGESSGLGHVHRALGHLDRDGGAQDKALDRYREALACYRRSSD TLGEAGTLKAMAAIQLALGHPDQARPQCEEALGLMREAGNLLGEAKASRLMARILAAEGRRDEARKAMHAAAKMFARAGD VASHDEAEQESKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27775; Mature: 27644
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSEADHVLDEAETLWLSGEKQRARECCLRARLLYHETGDVRGEADALTRMGDIEAETG CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC HGNGARQAYVEARQLYARGGDQREQGAVLVRLAHLAQREGDETQARALYQSALEVYDSAG CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC ESSGLGHVHRALGHLDRDGGAQDKALDRYREALACYRRSSDTLGEAGTLKAMAAIQLALG CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC HPDQARPQCEEALGLMREAGNLLGEAKASRLMARILAAEGRRDEARKAMHAAAKMFARAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DVASHDEAEQESKTL CCCCCCHHHHHHCCC >Mature Secondary Structure TRSEADHVLDEAETLWLSGEKQRARECCLRARLLYHETGDVRGEADALTRMGDIEAETG CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC HGNGARQAYVEARQLYARGGDQREQGAVLVRLAHLAQREGDETQARALYQSALEVYDSAG CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC ESSGLGHVHRALGHLDRDGGAQDKALDRYREALACYRRSSDTLGEAGTLKAMAAIQLALG CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC HPDQARPQCEEALGLMREAGNLLGEAKASRLMARILAAEGRRDEARKAMHAAAKMFARAG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DVASHDEAEQESKTL CCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA