Click here to switch to the map view.

The map label for this gene is ag45 [H]

Identifier: 83309841

GI number: 83309841

Start: 804140

End: 805405

Strand: Reverse

Name: ag45 [H]

Synonym: amb0742

Alternate gene names: 83309841

Gene position: 805405-804140 (Counterclockwise)

Preceding gene: 83309843

Following gene: 83309840

Centisome position: 16.21

GC content: 68.56

Gene sequence:

>1266_bases
TTGCCGAGGCTCCGCCGAAAGGCCATAAGGGAAGGCATGGATAGTTTCGTCATCGCCGTCTTCTTCCTCACCTATCTCGG
CATGGCCTTCGGCTCGGTGCCAGGCCTGCGGCTCGACCGTACCGGCATCGCCCTGCTGGCCGTGGTGGTCCTGCTGGTGT
CGGGCAAGGTGGGCGTCAAGGCCATGGGCACCTCCATCGACGTGCCCACCCTGCTGCTGCTGTTCGCCCTGATGATCGTC
TCGGCCCAGTTCCAGCTGGCCGGGGTCTATGGCGCCGTGGCGCAGAAGGTGGCAGAATCGCCCGGTTCGGCCCGGCGCCT
GTTGGCCCTGGTGGTGGCGGTGTCGGGCGGATTGTCGGCGGTGCTGGCCAATGACGTGGTCTGCTTCGCCATGACCCCGA
TCATCGCCGAGGGCATCCGTCGGCGCGGCCTCGATCCGCGTCCCTATCTGCTGGGGCTGGTGGGCGCCGCCAATGCCGGC
AGCGCCGCCACCCTGATCGGCAATCCCCAGAACATTCTGATCGGACAGGTGGGCGGGCTGGATTTCTGGAGCTTCCTGGC
CGCCTGCGCCGTCCCCGCCGCCCTGTCCCTGGTGGTGGTGTATTACTGCATCGCCTGGATCTGGCGGCGCGAGCTGGACG
CCACTCCCGGACCGGTGGAGGCCCATCCGCCGGCCGAGGGCCATCGCTGGCAGGCGGTCAAGGGCGGAATCGCCCTGGCT
ATCCTGGCCCTGCTGTTCGCCGCCCCCCTGCCACGCGAAGTGGGCGCCATGGCCATCGCCGCCCTGCTGCTTGCCAGCCG
CCGCATGTGCTCACGCGAGATGATCGGCCTGGTGGACTGGCACCTGCTGCTGCTGTTCGCCTGCCTGTTCGTGGTCACCG
GCGCCTTCGCCGATACCGACATGGCGCGTCACTGGGTCAACTGGCTGGCCGAGCACGGATTCTTCCCCGACTCGCTGAAG
GCCATGCTGCCGGTGGCGCTGGTCGCGTCGAACTCCATCGGCAACGTGCCGGCGGTGATGCTGATCCTGGCGGTGTGGCC
CACCCCCGATCCCGGGGCGCTGACCGGTCTGGCCCTGCTGTCGACCCTGGCGGGGAATTTCCTGCTGGTGGGCAGCATGG
CCAATATCATCGTGGCCGAACGCGCCGCCGGAGCCGGGTGCCGACTGTCCTTCGGTGACTTCGCCCGGGCCGGCATTCCC
GTGACCCTGCTGACCATGGCCATCGCCGTAATCTGGCTGCGGCTGGGCGGCTGGATGACGTGGTGA

Upstream 100 bases:

>100_bases
AAGCGCACCCAACCGAATCCAACCATCACATGCCCCCCAATGTTGCGACATTGATAGATACACCGGCGCCGCACCAATAG
CGAAGACAACACGGCGGGAC

Downstream 100 bases:

>100_bases
GGACGACATGACCGCCGCCGGAACCCTGCCCCATATCACCGCCTTTCTCAACGCGGTCTCGCTGGCCTTCCTGATAACGG
GCTTCGTTCATATCCGGGCG

Product: Na+/H+ antiporter NhaD and related arsenite permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MPRLRRKAIREGMDSFVIAVFFLTYLGMAFGSVPGLRLDRTGIALLAVVVLLVSGKVGVKAMGTSIDVPTLLLLFALMIV
SAQFQLAGVYGAVAQKVAESPGSARRLLALVVAVSGGLSAVLANDVVCFAMTPIIAEGIRRRGLDPRPYLLGLVGAANAG
SAATLIGNPQNILIGQVGGLDFWSFLAACAVPAALSLVVVYYCIAWIWRRELDATPGPVEAHPPAEGHRWQAVKGGIALA
ILALLFAAPLPREVGAMAIAALLLASRRMCSREMIGLVDWHLLLLFACLFVVTGAFADTDMARHWVNWLAEHGFFPDSLK
AMLPVALVASNSIGNVPAVMLILAVWPTPDPGALTGLALLSTLAGNFLLVGSMANIIVAERAAGAGCRLSFGDFARAGIP
VTLLTMAIAVIWLRLGGWMTW

Sequences:

>Translated_421_residues
MPRLRRKAIREGMDSFVIAVFFLTYLGMAFGSVPGLRLDRTGIALLAVVVLLVSGKVGVKAMGTSIDVPTLLLLFALMIV
SAQFQLAGVYGAVAQKVAESPGSARRLLALVVAVSGGLSAVLANDVVCFAMTPIIAEGIRRRGLDPRPYLLGLVGAANAG
SAATLIGNPQNILIGQVGGLDFWSFLAACAVPAALSLVVVYYCIAWIWRRELDATPGPVEAHPPAEGHRWQAVKGGIALA
ILALLFAAPLPREVGAMAIAALLLASRRMCSREMIGLVDWHLLLLFACLFVVTGAFADTDMARHWVNWLAEHGFFPDSLK
AMLPVALVASNSIGNVPAVMLILAVWPTPDPGALTGLALLSTLAGNFLLVGSMANIIVAERAAGAGCRLSFGDFARAGIP
VTLLTMAIAVIWLRLGGWMTW
>Mature_420_residues
PRLRRKAIREGMDSFVIAVFFLTYLGMAFGSVPGLRLDRTGIALLAVVVLLVSGKVGVKAMGTSIDVPTLLLLFALMIVS
AQFQLAGVYGAVAQKVAESPGSARRLLALVVAVSGGLSAVLANDVVCFAMTPIIAEGIRRRGLDPRPYLLGLVGAANAGS
AATLIGNPQNILIGQVGGLDFWSFLAACAVPAALSLVVVYYCIAWIWRRELDATPGPVEAHPPAEGHRWQAVKGGIALAI
LALLFAAPLPREVGAMAIAALLLASRRMCSREMIGLVDWHLLLLFACLFVVTGAFADTDMARHWVNWLAEHGFFPDSLKA
MLPVALVASNSIGNVPAVMLILAVWPTPDPGALTGLALLSTLAGNFLLVGSMANIIVAERAAGAGCRLSFGDFARAGIPV
TLLTMAIAVIWLRLGGWMTW

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

Organism=Escherichia coli, GI1787039, Length=329, Percent_Identity=28.2674772036474, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000802
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 44338; Mature: 44207

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLRRKAIREGMDSFVIAVFFLTYLGMAFGSVPGLRLDRTGIALLAVVVLLVSGKVGVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCE
AMGTSIDVPTLLLLFALMIVSAQFQLAGVYGAVAQKVAESPGSARRLLALVVAVSGGLSA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH
VLANDVVCFAMTPIIAEGIRRRGLDPRPYLLGLVGAANAGSAATLIGNPQNILIGQVGGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCEEEECCCCEEEEECCCCC
DFWSFLAACAVPAALSLVVVYYCIAWIWRRELDATPGPVEAHPPAEGHRWQAVKGGIALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHH
ILALLFAAPLPREVGAMAIAALLLASRRMCSREMIGLVDWHLLLLFACLFVVTGAFADTD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
MARHWVNWLAEHGFFPDSLKAMLPVALVASNSIGNVPAVMLILAVWPTPDPGALTGLALL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
STLAGNFLLVGSMANIIVAERAAGAGCRLSFGDFARAGIPVTLLTMAIAVIWLRLGGWMT
HHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
W
C
>Mature Secondary Structure 
PRLRRKAIREGMDSFVIAVFFLTYLGMAFGSVPGLRLDRTGIALLAVVVLLVSGKVGVK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCCE
AMGTSIDVPTLLLLFALMIVSAQFQLAGVYGAVAQKVAESPGSARRLLALVVAVSGGLSA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHH
VLANDVVCFAMTPIIAEGIRRRGLDPRPYLLGLVGAANAGSAATLIGNPQNILIGQVGGL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCEEEECCCCEEEEECCCCC
DFWSFLAACAVPAALSLVVVYYCIAWIWRRELDATPGPVEAHPPAEGHRWQAVKGGIALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHHH
ILALLFAAPLPREVGAMAIAALLLASRRMCSREMIGLVDWHLLLLFACLFVVTGAFADTD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
MARHWVNWLAEHGFFPDSLKAMLPVALVASNSIGNVPAVMLILAVWPTPDPGALTGLALL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
STLAGNFLLVGSMANIIVAERAAGAGCRLSFGDFARAGIPVTLLTMAIAVIWLRLGGWMT
HHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCC
W
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]