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The map label for this gene is ygaU [C]

Identifier: 83309705

GI number: 83309705

Start: 652555

End: 653499

Strand: Reverse

Name: ygaU [C]

Synonym: amb0606

Alternate gene names: 83309705

Gene position: 653499-652555 (Counterclockwise)

Preceding gene: 83309708

Following gene: 83309703

Centisome position: 13.16

GC content: 69.42

Gene sequence:

>945_bases
TTGAACCGGCCTAAGCTCGTCGCCCTCATCGGGCTTGCCGTCGCCGTGATCGCCATCGTGCTCGCCATGCTCAACCAGCG
TGACGAGACGAAGGACATGGAGGCGCAGATTCCCCCGCCGCCCGGCCCCGCCACCAGGGCCGCCATTGCCGAATTGGGCG
AGCCGTCCTTCGACGTTGTCCGCATCGATGCAGGCGGCGACGCGGTCATCGCCGGCCGCGCCAGGCCCGGCGCCCGGGTC
ACCGTCATCGACGGCACCCAGGAATTGGGCCAGGTCACCGCCGACGGGCGGGGGGAATGGGTGTTGCTGCCTCCCGGCCC
GCTGCCTCCCGGCTCGCGCGAGCTGCGGCTGAAGGCCGTCAATCCCGATGGCAGCCTGTCCGAATCGGGCGAGACCGTGG
TGCTGGTCGTGCCGCCGCGCGGCCAGGGCACCGCCCTGGCCATCAAATCGGGTCGCGACGGAAGCAGCCGCATCCTGCAA
GGACCCAACGCCGCCGCCGCTCCCAGCGGCCTGTCCCTCGACATCATCGACCACAACGACAAGGGCCGCATGACGGTCAG
TGGCCGCGCTCCCAACGGCGCCAGAATCAATCTCTACCTGGACAACGGCCTGCTGGGCCGCGCCTCCGCCGATGCCGAGG
GCAACTGGCGGGTGAGCGCCGCCTTGCCGCCGGGCAAGGGCACCCATCTGCTGCGCGCCGATCAGGTGGACGACAAGGGC
AAGGTTCTCGCCCGGGTCGAGGCCTCGTGGACCAGGGGCGAGGAGACCACCCTGAAGGGCGGTTCCACCGTGACCGTGCT
CCAGGGCAATTCCCTTTGGCGCATCGCCCGGCGGCTCTATGGCCAGGGCATGGCCTATACGGTGATCTTCGAGGCCAACC
GCGACCACATCAAGGACCCCGACCGCATCTATCCCGGCCAGGTGTTCAGCGTTCCGGCGAAATAG

Upstream 100 bases:

>100_bases
ACCCATGAAACGGGCGCAAGCGACGGATTCGCGCCCGTGACACTGGGGGAAATAAGGGCTAGGGTAGCGGCCGCCTCCAC
CACCACACAGCGAGGAGCCG

Downstream 100 bases:

>100_bases
AGTTCTTCGCACTTAAGCTGAATCGGAAAGTCGAAGAACTCTTAAGCCCGAGCGGCGCTTGAGCCCTGAAAAAACGGAGC
TTTTTCGTACAGACAGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNRPKLVALIGLAVAVIAIVLAMLNQRDETKDMEAQIPPPPGPATRAAIAELGEPSFDVVRIDAGGDAVIAGRARPGARV
TVIDGTQELGQVTADGRGEWVLLPPGPLPPGSRELRLKAVNPDGSLSESGETVVLVVPPRGQGTALAIKSGRDGSSRILQ
GPNAAAAPSGLSLDIIDHNDKGRMTVSGRAPNGARINLYLDNGLLGRASADAEGNWRVSAALPPGKGTHLLRADQVDDKG
KVLARVEASWTRGEETTLKGGSTVTVLQGNSLWRIARRLYGQGMAYTVIFEANRDHIKDPDRIYPGQVFSVPAK

Sequences:

>Translated_314_residues
MNRPKLVALIGLAVAVIAIVLAMLNQRDETKDMEAQIPPPPGPATRAAIAELGEPSFDVVRIDAGGDAVIAGRARPGARV
TVIDGTQELGQVTADGRGEWVLLPPGPLPPGSRELRLKAVNPDGSLSESGETVVLVVPPRGQGTALAIKSGRDGSSRILQ
GPNAAAAPSGLSLDIIDHNDKGRMTVSGRAPNGARINLYLDNGLLGRASADAEGNWRVSAALPPGKGTHLLRADQVDDKG
KVLARVEASWTRGEETTLKGGSTVTVLQGNSLWRIARRLYGQGMAYTVIFEANRDHIKDPDRIYPGQVFSVPAK
>Mature_314_residues
MNRPKLVALIGLAVAVIAIVLAMLNQRDETKDMEAQIPPPPGPATRAAIAELGEPSFDVVRIDAGGDAVIAGRARPGARV
TVIDGTQELGQVTADGRGEWVLLPPGPLPPGSRELRLKAVNPDGSLSESGETVVLVVPPRGQGTALAIKSGRDGSSRILQ
GPNAAAAPSGLSLDIIDHNDKGRMTVSGRAPNGARINLYLDNGLLGRASADAEGNWRVSAALPPGKGTHLLRADQVDDKG
KVLARVEASWTRGEETTLKGGSTVTVLQGNSLWRIARRLYGQGMAYTVIFEANRDHIKDPDRIYPGQVFSVPAK

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 4340 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33006; Mature: 33006

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPKLVALIGLAVAVIAIVLAMLNQRDETKDMEAQIPPPPGPATRAAIAELGEPSFDVV
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
RIDAGGDAVIAGRARPGARVTVIDGTQELGQVTADGRGEWVLLPPGPLPPGSRELRLKAV
EEECCCCEEEEECCCCCCEEEEECCCHHHCCEECCCCCCEEEECCCCCCCCCCEEEEEEE
NPDGSLSESGETVVLVVPPRGQGTALAIKSGRDGSSRILQGPNAAAAPSGLSLDIIDHND
CCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHEEECCCCCCCCCCCEEEEEECCC
KGRMTVSGRAPNGARINLYLDNGLLGRASADAEGNWRVSAALPPGKGTHLLRADQVDDKG
CCCEEECCCCCCCCEEEEEECCCEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCC
KVLARVEASWTRGEETTLKGGSTVTVLQGNSLWRIARRLYGQGMAYTVIFEANRDHIKDP
CEEEEEECCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCCCCCC
DRIYPGQVFSVPAK
CCCCCCCEEECCCC
>Mature Secondary Structure
MNRPKLVALIGLAVAVIAIVLAMLNQRDETKDMEAQIPPPPGPATRAAIAELGEPSFDVV
CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE
RIDAGGDAVIAGRARPGARVTVIDGTQELGQVTADGRGEWVLLPPGPLPPGSRELRLKAV
EEECCCCEEEEECCCCCCEEEEECCCHHHCCEECCCCCCEEEECCCCCCCCCCEEEEEEE
NPDGSLSESGETVVLVVPPRGQGTALAIKSGRDGSSRILQGPNAAAAPSGLSLDIIDHND
CCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHEEECCCCCCCCCCCEEEEEECCC
KGRMTVSGRAPNGARINLYLDNGLLGRASADAEGNWRVSAALPPGKGTHLLRADQVDDKG
CCCEEECCCCCCCCEEEEEECCCEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCC
KVLARVEASWTRGEETTLKGGSTVTVLQGNSLWRIARRLYGQGMAYTVIFEANRDHIKDP
CEEEEEECCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCCCCCCC
DRIYPGQVFSVPAK
CCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA