| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309691
Identifier: 83309691
GI number: 83309691
Start: 639260
End: 640081
Strand: Reverse
Name: 83309691
Synonym: amb0592
Alternate gene names: NA
Gene position: 640081-639260 (Counterclockwise)
Preceding gene: 83309692
Following gene: 83309689
Centisome position: 12.89
GC content: 71.78
Gene sequence:
>822_bases ATGAGACGCCTTTCCCTTCTGCTTCTTCTGCTGCTGACAACCGCCTGCGGCGACATTCCCCAGCCCTTCCGGCACGAAGG TCTCAACGCGGCGGTATCGCCACCCGGGCCGCGCGGCGTGGTGGTGCGCCCGCCCGATGACAGCCCCAGCGGCGCCGCCC TGGCCAAGGCCATCATCAAGCGCCTGAGCGAGCAGGACATCCCCGCCTCCAGCCGCAGCGCCGCCGCCGGCTCTTGGGTG CTGGCCGCCACGCCGGAAACCTCCATCGCCACCAAACGGCTGGTCTGGCGCCTGATCCCCCCGGACGGCGACATCCCGGC CGCGATCACCCAGTCCCTGCCAGCCGCCCTGTGGGAGACGGCGGGTCCGGCCACCATCGACCGCATGGCCGACGAAGTGG TGGCGAAATATGCCGCGACCCTGCACGGCGAGCCCGAACAGCCGCTCGATTCCGCCCCGGCGCGGGTGCCGGCAATCCGC CTGGAACCCCTGGCCGGGCTGCCGGGCGATGGCGACAGCGCCTTGTCCCGGGCCCTGGGCCAAGCCCTGCGGCGCTTGGG ACTCAGGCTGGGCGGTCCGGAAGCCGACGTGACGGTGTTGGGCCGGATCACCCTGGTGCCCGGCCGTCCGGGCGAGGAGA TCCTCGACGTCACCTGGGTGGTGCAGGACGCCAGGACCGGCAAGGAACTGGGCAAGGCCGCCCAGCAGGGTGCCCTGCCC AAGGGCCGGCTGAGCGGTCCCTGGGGCGCTCTGGCCGGCGATATCGCCGCCGGCGGGGCCGAGGGTATCGCGGACATCAT AGCCGCCATACCTCAGAAATAA
Upstream 100 bases:
>100_bases ACACCCTGCGCGACGAGGCTCGCTTCTTCAGCTATCGCCGCGCCACCTTGCGCGGCGAGGCCGATTACGGACGCCAGATC TCGGTGATCACGCTGGATCG
Downstream 100 bases:
>100_bases GGGGCCGGTCATAGGCACCAGTTTACAGAGCGGGTATCCGGCTGTTATACGGGTGCCGGTTTCACGGAGCGCAGCGGCGC GCTAACCCGGCGGTATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRRLSLLLLLLLTTACGDIPQPFRHEGLNAAVSPPGPRGVVVRPPDDSPSGAALAKAIIKRLSEQDIPASSRSAAAGSWV LAATPETSIATKRLVWRLIPPDGDIPAAITQSLPAALWETAGPATIDRMADEVVAKYAATLHGEPEQPLDSAPARVPAIR LEPLAGLPGDGDSALSRALGQALRRLGLRLGGPEADVTVLGRITLVPGRPGEEILDVTWVVQDARTGKELGKAAQQGALP KGRLSGPWGALAGDIAAGGAEGIADIIAAIPQK
Sequences:
>Translated_273_residues MRRLSLLLLLLLTTACGDIPQPFRHEGLNAAVSPPGPRGVVVRPPDDSPSGAALAKAIIKRLSEQDIPASSRSAAAGSWV LAATPETSIATKRLVWRLIPPDGDIPAAITQSLPAALWETAGPATIDRMADEVVAKYAATLHGEPEQPLDSAPARVPAIR LEPLAGLPGDGDSALSRALGQALRRLGLRLGGPEADVTVLGRITLVPGRPGEEILDVTWVVQDARTGKELGKAAQQGALP KGRLSGPWGALAGDIAAGGAEGIADIIAAIPQK >Mature_273_residues MRRLSLLLLLLLTTACGDIPQPFRHEGLNAAVSPPGPRGVVVRPPDDSPSGAALAKAIIKRLSEQDIPASSRSAAAGSWV LAATPETSIATKRLVWRLIPPDGDIPAAITQSLPAALWETAGPATIDRMADEVVAKYAATLHGEPEQPLDSAPARVPAIR LEPLAGLPGDGDSALSRALGQALRRLGLRLGGPEADVTVLGRITLVPGRPGEEILDVTWVVQDARTGKELGKAAQQGALP KGRLSGPWGALAGDIAAGGAEGIADIIAAIPQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28119; Mature: 28119
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLSLLLLLLLTTACGDIPQPFRHEGLNAAVSPPGPRGVVVRPPDDSPSGAALAKAIIK CHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH RLSEQDIPASSRSAAAGSWVLAATPETSIATKRLVWRLIPPDGDIPAAITQSLPAALWET HHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHC AGPATIDRMADEVVAKYAATLHGEPEQPLDSAPARVPAIRLEPLAGLPGDGDSALSRALG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH QALRRLGLRLGGPEADVTVLGRITLVPGRPGEEILDVTWVVQDARTGKELGKAAQQGALP HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KGRLSGPWGALAGDIAAGGAEGIADIIAAIPQK CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRRLSLLLLLLLTTACGDIPQPFRHEGLNAAVSPPGPRGVVVRPPDDSPSGAALAKAIIK CHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH RLSEQDIPASSRSAAAGSWVLAATPETSIATKRLVWRLIPPDGDIPAAITQSLPAALWET HHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHC AGPATIDRMADEVVAKYAATLHGEPEQPLDSAPARVPAIRLEPLAGLPGDGDSALSRALG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHH QALRRLGLRLGGPEADVTVLGRITLVPGRPGEEILDVTWVVQDARTGKELGKAAQQGALP HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KGRLSGPWGALAGDIAAGGAEGIADIIAAIPQK CCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA