Click here to switch to the map view.

The map label for this gene is nrtC [H]

Identifier: 83309636

GI number: 83309636

Start: 582948

End: 584360

Strand: Reverse

Name: nrtC [H]

Synonym: amb0537

Alternate gene names: 83309636

Gene position: 584360-582948 (Counterclockwise)

Preceding gene: 83309640

Following gene: 83309635

Centisome position: 11.76

GC content: 63.62

Gene sequence:

>1413_bases
ATGAGCAAGATGACCAACTTCGGAAACACAGGCTTGGCGCGACGCGCCGCCCTGGGACTGGCGGCGGCCGGCCTGATGGC
CCTTGCCCTGCCCCATGGCGCCGAAGCCGCCAAGCTGAAGCTGGAAAAGGACGAACTGAAGCTCGGCTTCATCAAGCTGA
CCGACATGGCGCCCCTGGCCATCGCCAAGGAAAAGGGATTCTTCGAGGACGAGGGCCTGTTCGTCACCCTGGAGCCCCAG
GCCAACTGGAAGGTACTGCTGGACCGCGTCATCTCTGGCGAGCTGGACGGCGCCCACATGCTGGCCGGACAGCCCATCGG
CGCCACCATCGGCTACGGCACCCAGGCCCACGTGGTCACAGCCTTCTCCATGGACCTCAACGGCAACGGCATCACCGTCT
CCAATGAGGTCTGGGAGGCGATGAAGCCGCACCTGCCCAAGGGGCCCGACGGCAAGATCGCCCACCCCATCAAGGCCGAC
GCCCTGAAGAAGGTGGTCGACGCCATGAAGGCCCAGGGCAAGAGCTTCAACATGGGCATGGTCTTCCCGGTCTCGACCCA
TAATTACGAACTGCGCTACTGGCTGGCCTCGGGCGGCATCAATCCCGGCTATTACAGCCCCGACAACGTCTCGGGCCAGA
TCGCCGCCGACGCGCTGCTGTCGGTGACGCCGCCGCCCCAGATGCCCGCCACCCTGGAGGCCGGCACCATCTCGGGCTAC
AGCGTCGGCGAGCCGTGGAACCAGGCCGCCGTGTTCAAGGGCATCGGCGTGCCGGTGATCACCGATTACGAGATCTGGAA
GAACAATCCCGAGAAGGTGTTCGGCGTCAACAACGCCTGGGCCGAGAAGTATCCCAACACCCATCTGGCGGTGGTCAAGG
CGCTGATCCGCGCCGGCAAGTGGCTGGACGAGAACAACAACGCCAACCGCGATGAGGCCGTGAAAATCCTGGCCAAGTCG
GAATACGTGGGCGCCGACGCCAAGGTCATCGCCAATTCCATGACCGGCACCTTCGAATACGAGAAGGGCGACAAGCGCGC
CGTTCCCGATTTCAACGTGTTCTACCGCTACTTCGCCACCTATCCCTTCTACTCGGACGCCGTCTGGTATCTCAGCCAGA
TGCGCCGCTGGGGCCAGATCGCCGAGGCCAAGCCCGATGCCTGGTACGCCGACATGGCCAAGAAGGTCTACAAGCCCGAC
GTCTACCTGAAGGCCGCCAAGCTGCTGCTCGACGAGGGCAAGGTCGCCAAGGAGGACTTCCCCTGGGACAGCGACGGCTA
CCGCGCCCCCACCGCCGAGTTCATCGACGGCATCAGCTATGACGGCAAGAAGCCCAACGACTACCTGAAGAAGTTCACCA
TCGGCCTCAAGGGCGCCCAAAAGCTCGAGAGCAACAAGGTGGTCGGCAACTGA

Upstream 100 bases:

>100_bases
ACAAAGGCGTTCCACGGAATTGCGCTCCCCGCCAAGGGGCTGCGTGACGCCGCGGAGCGCCTTTTTTGCGTTTTGAACTC
CAGACTTGGCGAGGGCTGAC

Downstream 100 bases:

>100_bases
CGTTCATCATCGCCGCCGGGACCCCTCCCGGCGGCGGTGAAAGAGGGCAAGAGCGAGACAAGACGTGACTGCAAGCGAGG
ACCCGATCATGAACAGCATT

Product: ABC-type nitrate/sulfonate/bicarbonate transport systems

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSKMTNFGNTGLARRAALGLAAAGLMALALPHGAEAAKLKLEKDELKLGFIKLTDMAPLAIAKEKGFFEDEGLFVTLEPQ
ANWKVLLDRVISGELDGAHMLAGQPIGATIGYGTQAHVVTAFSMDLNGNGITVSNEVWEAMKPHLPKGPDGKIAHPIKAD
ALKKVVDAMKAQGKSFNMGMVFPVSTHNYELRYWLASGGINPGYYSPDNVSGQIAADALLSVTPPPQMPATLEAGTISGY
SVGEPWNQAAVFKGIGVPVITDYEIWKNNPEKVFGVNNAWAEKYPNTHLAVVKALIRAGKWLDENNNANRDEAVKILAKS
EYVGADAKVIANSMTGTFEYEKGDKRAVPDFNVFYRYFATYPFYSDAVWYLSQMRRWGQIAEAKPDAWYADMAKKVYKPD
VYLKAAKLLLDEGKVAKEDFPWDSDGYRAPTAEFIDGISYDGKKPNDYLKKFTIGLKGAQKLESNKVVGN

Sequences:

>Translated_470_residues
MSKMTNFGNTGLARRAALGLAAAGLMALALPHGAEAAKLKLEKDELKLGFIKLTDMAPLAIAKEKGFFEDEGLFVTLEPQ
ANWKVLLDRVISGELDGAHMLAGQPIGATIGYGTQAHVVTAFSMDLNGNGITVSNEVWEAMKPHLPKGPDGKIAHPIKAD
ALKKVVDAMKAQGKSFNMGMVFPVSTHNYELRYWLASGGINPGYYSPDNVSGQIAADALLSVTPPPQMPATLEAGTISGY
SVGEPWNQAAVFKGIGVPVITDYEIWKNNPEKVFGVNNAWAEKYPNTHLAVVKALIRAGKWLDENNNANRDEAVKILAKS
EYVGADAKVIANSMTGTFEYEKGDKRAVPDFNVFYRYFATYPFYSDAVWYLSQMRRWGQIAEAKPDAWYADMAKKVYKPD
VYLKAAKLLLDEGKVAKEDFPWDSDGYRAPTAEFIDGISYDGKKPNDYLKKFTIGLKGAQKLESNKVVGN
>Mature_469_residues
SKMTNFGNTGLARRAALGLAAAGLMALALPHGAEAAKLKLEKDELKLGFIKLTDMAPLAIAKEKGFFEDEGLFVTLEPQA
NWKVLLDRVISGELDGAHMLAGQPIGATIGYGTQAHVVTAFSMDLNGNGITVSNEVWEAMKPHLPKGPDGKIAHPIKADA
LKKVVDAMKAQGKSFNMGMVFPVSTHNYELRYWLASGGINPGYYSPDNVSGQIAADALLSVTPPPQMPATLEAGTISGYS
VGEPWNQAAVFKGIGVPVITDYEIWKNNPEKVFGVNNAWAEKYPNTHLAVVKALIRAGKWLDENNNANRDEAVKILAKSE
YVGADAKVIANSMTGTFEYEKGDKRAVPDFNVFYRYFATYPFYSDAVWYLSQMRRWGQIAEAKPDAWYADMAKKVYKPDV
YLKAAKLLLDEGKVAKEDFPWDSDGYRAPTAEFIDGISYDGKKPNDYLKKFTIGLKGAQKLESNKVVGN

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 51421; Mature: 51290

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMTNFGNTGLARRAALGLAAAGLMALALPHGAEAAKLKLEKDELKLGFIKLTDMAPLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCEEEEEEEECCCCCEE
IAKEKGFFEDEGLFVTLEPQANWKVLLDRVISGELDGAHMLAGQPIGATIGYGTQAHVVT
EECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCEEEEE
AFSMDLNGNGITVSNEVWEAMKPHLPKGPDGKIAHPIKADALKKVVDAMKAQGKSFNMGM
EEEEEECCCCEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEE
VFPVSTHNYELRYWLASGGINPGYYSPDNVSGQIAADALLSVTPPPQMPATLEAGTISGY
EEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCC
SVGEPWNQAAVFKGIGVPVITDYEIWKNNPEKVFGVNNAWAEKYPNTHLAVVKALIRAGK
CCCCCCCCHHHHHCCCCCEEECHHHHCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCC
WLDENNNANRDEAVKILAKSEYVGADAKVIANSMTGTFEYEKGDKRAVPDFNVFYRYFAT
CCCCCCCCCHHHHHEEEECCCCCCCCHHHHECCCCCEEEECCCCCCCCCCHHHHHHHHHC
YPFYSDAVWYLSQMRRWGQIAEAKPDAWYADMAKKVYKPDVYLKAAKLLLDEGKVAKEDF
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PWDSDGYRAPTAEFIDGISYDGKKPNDYLKKFTIGLKGAQKLESNKVVGN
CCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SKMTNFGNTGLARRAALGLAAAGLMALALPHGAEAAKLKLEKDELKLGFIKLTDMAPLA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCEEEEEEEECCCCCEE
IAKEKGFFEDEGLFVTLEPQANWKVLLDRVISGELDGAHMLAGQPIGATIGYGTQAHVVT
EECCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCEEEEE
AFSMDLNGNGITVSNEVWEAMKPHLPKGPDGKIAHPIKADALKKVVDAMKAQGKSFNMGM
EEEEEECCCCEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEE
VFPVSTHNYELRYWLASGGINPGYYSPDNVSGQIAADALLSVTPPPQMPATLEAGTISGY
EEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCC
SVGEPWNQAAVFKGIGVPVITDYEIWKNNPEKVFGVNNAWAEKYPNTHLAVVKALIRAGK
CCCCCCCCHHHHHCCCCCEEECHHHHCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHCCC
WLDENNNANRDEAVKILAKSEYVGADAKVIANSMTGTFEYEKGDKRAVPDFNVFYRYFAT
CCCCCCCCCHHHHHEEEECCCCCCCCHHHHECCCCCEEEECCCCCCCCCCHHHHHHHHHC
YPFYSDAVWYLSQMRRWGQIAEAKPDAWYADMAKKVYKPDVYLKAAKLLLDEGKVAKEDF
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PWDSDGYRAPTAEFIDGISYDGKKPNDYLKKFTIGLKGAQKLESNKVVGN
CCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]