| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is fliH
Identifier: 83309600
GI number: 83309600
Start: 535423
End: 536100
Strand: Reverse
Name: fliH
Synonym: amb0501
Alternate gene names: NA
Gene position: 536100-535423 (Counterclockwise)
Preceding gene: 83309601
Following gene: 83309599
Centisome position: 10.79
GC content: 67.4
Gene sequence:
>678_bases ATGGCCTATCAGAAGTACATGTTCGACCTGGACTTCGGTCCACCGCCCGCCAACCGGCCGAAGCCGGCCGAGCAGGCCGA GGACGTCTTCGAGGTCGAGCCCGAGCCCGATCTGCCGCCGCCGCCCACCTTCACCGAGGAAGACCTCCAGGTGGTGCGCG AGGCGGCCTACGAGGAGGGCCACCGCAACGGCACCGCCGAGGCCAACGAAACCCAGCAGGCCCTGCTGGCCGCCTCGCTG GACCGGGTGTCCAACGCCCTGGCCATGCTGGACGCCGCCCAGGCCGACGCCAACGACCTCAACCAGAGGATCGCCGCCCG GGTGGCCATGGCGGTCTTGAAAAAAGTCCTGCCCGCTGCCTGCGAGCAGAACGCCTTCGAGGAAGTCGTCCGCACGGTTC AGGAATGTCTAACTCATGTGCTGGACGAACCGCGTATCATCGTCCGAGTGGATTCGTCGCTGGTCGACCCCTTGCGCGAG CGCCTGGAACACACCGCCATCGAACACGGCTTCGAAGGCCGCGTGGTGGTCCAGGCCGATCCCCGGGTCGCCATCGGCGA TTGCCGGGTGGAATGGACGGACGGCGGAGCGGAACGCGATCAGGTTCGTCTGATCGCCGATATCGAGACGGCGGTGAACC GGGCCCTGGCGCTGCCCGAAGGCCGCCCGGAAGAGTAA
Upstream 100 bases:
>100_bases GGCCCAGGCCGCCATCGTGGTCATGGCCAAGGAACTGGCGGCGTCGGGACAGATCGTCATCTCCGAGGGCCGCGAGGAAG ACGAGCTGGTGTACTAGTCC
Downstream 100 bases:
>100_bases CAGGAGGATTCCATGCCCGACTTCGAACTCAACGATTTCAAGCCCGAGGTGGAGGAGCAGGGACGGGGCGACGTCCCGGA CATGCCTCGGTCGGCCCGCG
Product: flagellar assembly protein H
Products: NA
Alternate protein names: FliH Protein; Flagellar Assembly Protein FliH; Flagellar Export Protein
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAYQKYMFDLDFGPPPANRPKPAEQAEDVFEVEPEPDLPPPPTFTEEDLQVVREAAYEEGHRNGTAEANETQQALLAASL DRVSNALAMLDAAQADANDLNQRIAARVAMAVLKKVLPAACEQNAFEEVVRTVQECLTHVLDEPRIIVRVDSSLVDPLRE RLEHTAIEHGFEGRVVVQADPRVAIGDCRVEWTDGGAERDQVRLIADIETAVNRALALPEGRPEE
Sequences:
>Translated_225_residues MAYQKYMFDLDFGPPPANRPKPAEQAEDVFEVEPEPDLPPPPTFTEEDLQVVREAAYEEGHRNGTAEANETQQALLAASL DRVSNALAMLDAAQADANDLNQRIAARVAMAVLKKVLPAACEQNAFEEVVRTVQECLTHVLDEPRIIVRVDSSLVDPLRE RLEHTAIEHGFEGRVVVQADPRVAIGDCRVEWTDGGAERDQVRLIADIETAVNRALALPEGRPEE >Mature_224_residues AYQKYMFDLDFGPPPANRPKPAEQAEDVFEVEPEPDLPPPPTFTEEDLQVVREAAYEEGHRNGTAEANETQQALLAASLD RVSNALAMLDAAQADANDLNQRIAARVAMAVLKKVLPAACEQNAFEEVVRTVQECLTHVLDEPRIIVRVDSSLVDPLRER LEHTAIEHGFEGRVVVQADPRVAIGDCRVEWTDGGAERDQVRLIADIETAVNRALALPEGRPEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24869; Mature: 24738
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQKYMFDLDFGPPPANRPKPAEQAEDVFEVEPEPDLPPPPTFTEEDLQVVREAAYEEG CCCHHEEEECCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH HRNGTAEANETQQALLAASLDRVSNALAMLDAAQADANDLNQRIAARVAMAVLKKVLPAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CEQNAFEEVVRTVQECLTHVLDEPRIIVRVDSSLVDPLRERLEHTAIEHGFEGRVVVQAD HCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEC PRVAIGDCRVEWTDGGAERDQVRLIADIETAVNRALALPEGRPEE CCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AYQKYMFDLDFGPPPANRPKPAEQAEDVFEVEPEPDLPPPPTFTEEDLQVVREAAYEEG CCHHEEEECCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH HRNGTAEANETQQALLAASLDRVSNALAMLDAAQADANDLNQRIAARVAMAVLKKVLPAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH CEQNAFEEVVRTVQECLTHVLDEPRIIVRVDSSLVDPLRERLEHTAIEHGFEGRVVVQAD HCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEC PRVAIGDCRVEWTDGGAERDQVRLIADIETAVNRALALPEGRPEE CCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA