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The map label for this gene is yhbU [H]

Identifier: 83309590

GI number: 83309590

Start: 523295

End: 524326

Strand: Reverse

Name: yhbU [H]

Synonym: amb0491

Alternate gene names: 83309590

Gene position: 524326-523295 (Counterclockwise)

Preceding gene: 83309591

Following gene: 83309589

Centisome position: 10.56

GC content: 67.54

Gene sequence:

>1032_bases
ATGGCATCGCTCCCTTCCCCCTCCCCCTCCACCTCCACCTCCTCCACCCGTCCCGAACTGGTCTGCCCGGCCGGCACCCC
GGCGGCGCTGCGCAGCGCCGTGGATGCCGGCGCCGATTGCGTCTATGTGGGCTTTCGCGACGAGACCAACGCCCGCAACT
TCCCCGGCCTCAACTTCAACCGCAAGGAATTGGGCGAAGGCATCGCCTATGCCCACGAGCGCGGTGCCAAGGTGCTGGTG
GCCATCAACACCTTCCCGCGCGCCGGCCAGCCGGAAATCTGGCATCAGGCGGTCGCCGACGCGGCGAAGCTCAAGGCCGA
CGCCGCCATCCTGGCCGATATCGGCCTGATCGAGCACGCCCACCGCACCCATCCCGAGCTGCGGCTGCATCTGTCGGTGC
AGGCTGCCGCCTCCAACCCCGACGCCATCCGGTTCTATGCCGAGCGCTTCGGAGTCAGGCGGGTGGTGCTGCCCCGCGTG
CTGACGGTGCAGGAAATCGCCGCGCTCAATCCCCGCATCGCCCCGGTCGAGACCGAGGTCTTCGTGTTCGGCGGATTGTG
CGTCATGGCCGAGGGACGCTGTGCCCTGTCGTCATACGTGACCGGTCAGTCGCCCAACATGAATGGCGTGTGCTCGCCGG
CCGGTGAGGTGCGCTATACCGAGACCTCCCAGGGCATCACCTCGGAACTGGGCGGCTTCACCATCAACAAGTTCGCCCAT
GACGAGGCGGCGGGCTATCCCACCCTGTGCAAGGGCCGCTTCATCGCCCATGACAAGGCCAGCTATCTGTTCGAGGAACC
CACCTCGCTCAACACGCTGACCATGCTGCCCGATCTGATCAAGGCCGGCGTGACCGCCTTCAAGATCGAGGGCCGCCAGC
GCGGCCGCGCCTATGTGGCCGCCGTGGTCCAGGCCTTCCGCGCCGGGGTGGACGCGGTCATGGCCGGCAAGCCGCTGCCC
GATATCGATCTCGACCGCATCACCGAAGGCGGCAAGCAGACCACCGGCGCCTACGAGAAGGCTTGGCGATGA

Upstream 100 bases:

>100_bases
CGGCGGTCAAGGATTCCGCCAACCAGGGGGCGCGCATAGCCCAGTTGGAAGGCGAGCTGAAGCAGCTTCGCAAGGCGGCA
CGGCGCGGAGGCGTGGCCTG

Downstream 100 bases:

>100_bases
GCATGTCCGTCATTCCGACGACCATCGGGAGGAGGAATCTCCTTCTGGCCGGACGGTTCAAATCGGCCCGTATCCTGCCA
AGCGGAGATCCCTCGACTTC

Product: putative protease yhbU precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MASLPSPSPSTSTSSTRPELVCPAGTPAALRSAVDAGADCVYVGFRDETNARNFPGLNFNRKELGEGIAYAHERGAKVLV
AINTFPRAGQPEIWHQAVADAAKLKADAAILADIGLIEHAHRTHPELRLHLSVQAAASNPDAIRFYAERFGVRRVVLPRV
LTVQEIAALNPRIAPVETEVFVFGGLCVMAEGRCALSSYVTGQSPNMNGVCSPAGEVRYTETSQGITSELGGFTINKFAH
DEAAGYPTLCKGRFIAHDKASYLFEEPTSLNTLTMLPDLIKAGVTAFKIEGRQRGRAYVAAVVQAFRAGVDAVMAGKPLP
DIDLDRITEGGKQTTGAYEKAWR

Sequences:

>Translated_343_residues
MASLPSPSPSTSTSSTRPELVCPAGTPAALRSAVDAGADCVYVGFRDETNARNFPGLNFNRKELGEGIAYAHERGAKVLV
AINTFPRAGQPEIWHQAVADAAKLKADAAILADIGLIEHAHRTHPELRLHLSVQAAASNPDAIRFYAERFGVRRVVLPRV
LTVQEIAALNPRIAPVETEVFVFGGLCVMAEGRCALSSYVTGQSPNMNGVCSPAGEVRYTETSQGITSELGGFTINKFAH
DEAAGYPTLCKGRFIAHDKASYLFEEPTSLNTLTMLPDLIKAGVTAFKIEGRQRGRAYVAAVVQAFRAGVDAVMAGKPLP
DIDLDRITEGGKQTTGAYEKAWR
>Mature_342_residues
ASLPSPSPSTSTSSTRPELVCPAGTPAALRSAVDAGADCVYVGFRDETNARNFPGLNFNRKELGEGIAYAHERGAKVLVA
INTFPRAGQPEIWHQAVADAAKLKADAAILADIGLIEHAHRTHPELRLHLSVQAAASNPDAIRFYAERFGVRRVVLPRVL
TVQEIAALNPRIAPVETEVFVFGGLCVMAEGRCALSSYVTGQSPNMNGVCSPAGEVRYTETSQGITSELGGFTINKFAHD
EAAGYPTLCKGRFIAHDKASYLFEEPTSLNTLTMLPDLIKAGVTAFKIEGRQRGRAYVAAVVQAFRAGVDAVMAGKPLPD
IDLDRITEGGKQTTGAYEKAWR

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=47.4320241691843, Blast_Score=319, Evalue=2e-88,
Organism=Escherichia coli, GI1788397, Length=336, Percent_Identity=32.1428571428571, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI87081910, Length=306, Percent_Identity=30.0653594771242, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36737; Mature: 36606

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLPSPSPSTSTSSTRPELVCPAGTPAALRSAVDAGADCVYVGFRDETNARNFPGLNFN
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
RKELGEGIAYAHERGAKVLVAINTFPRAGQPEIWHQAVADAAKLKADAAILADIGLIEHA
HHHHHCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRTHPELRLHLSVQAAASNPDAIRFYAERFGVRRVVLPRVLTVQEIAALNPRIAPVETEV
HHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
FVFGGLCVMAEGRCALSSYVTGQSPNMNGVCSPAGEVRYTETSQGITSELGGFTINKFAH
EEECCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCEEEEHHCC
DEAAGYPTLCKGRFIAHDKASYLFEEPTSLNTLTMLPDLIKAGVTAFKIEGRQRGRAYVA
HHCCCCCCHHCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHH
AVVQAFRAGVDAVMAGKPLPDIDLDRITEGGKQTTGAYEKAWR
HHHHHHHHCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
ASLPSPSPSTSTSSTRPELVCPAGTPAALRSAVDAGADCVYVGFRDETNARNFPGLNFN
CCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
RKELGEGIAYAHERGAKVLVAINTFPRAGQPEIWHQAVADAAKLKADAAILADIGLIEHA
HHHHHCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRTHPELRLHLSVQAAASNPDAIRFYAERFGVRRVVLPRVLTVQEIAALNPRIAPVETEV
HHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE
FVFGGLCVMAEGRCALSSYVTGQSPNMNGVCSPAGEVRYTETSQGITSELGGFTINKFAH
EEECCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHCCEEEEHHCC
DEAAGYPTLCKGRFIAHDKASYLFEEPTSLNTLTMLPDLIKAGVTAFKIEGRQRGRAYVA
HHCCCCCCHHCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHH
AVVQAFRAGVDAVMAGKPLPDIDLDRITEGGKQTTGAYEKAWR
HHHHHHHHCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]