Click here to switch to the map view.

The map label for this gene is 83309581

Identifier: 83309581

GI number: 83309581

Start: 513201

End: 513431

Strand: Reverse

Name: 83309581

Synonym: amb0482

Alternate gene names: NA

Gene position: 513431-513201 (Counterclockwise)

Preceding gene: 83309582

Following gene: 83309562

Centisome position: 10.34

GC content: 61.9

Gene sequence:

>231_bases
TTGGCTACCCGCATGGATCTGCGGGAGCTATTCGCCACCAACCTCCGCCGACTGCGCCACGATAAGGGCCTGTCGCAGGA
CGAACTTGCCTGCGACGCGGAAATGAGCCGGAGCTATCTAGCCCAGCTTGAAACCGGCAAGTACCACGCCAGCCTGAAAA
TCATCGGTCGGCTGGCGGATGTGCTGGAAGTGGACCCGGTGGAGTTTCTCAAGGGGCCAGCGGGGCGATAG

Upstream 100 bases:

>100_bases
TGTTTTTGCCGGAAAAAGTTTTGCACTGACTTTCCACCGCCCCATCGGGCTGCCGGGCAGTTTGCTCAGTATATCGAGGT
GCAACTTTCCAGCAAGGTGA

Downstream 100 bases:

>100_bases
CGGCGGGACTGGGGCGAAGATGGGTCATTGTGGGTCATGGTCCCGAAGGCGGATATCTCTGCGGGTCCAGCCAACGCAGA
AAAAGAGATCCTACTGGCCA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator Protein; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MATRMDLRELFATNLRRLRHDKGLSQDELACDAEMSRSYLAQLETGKYHASLKIIGRLADVLEVDPVEFLKGPAGR

Sequences:

>Translated_76_residues
MATRMDLRELFATNLRRLRHDKGLSQDELACDAEMSRSYLAQLETGKYHASLKIIGRLADVLEVDPVEFLKGPAGR
>Mature_75_residues
ATRMDLRELFATNLRRLRHDKGLSQDELACDAEMSRSYLAQLETGKYHASLKIIGRLADVLEVDPVEFLKGPAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8589; Mature: 8458

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRMDLRELFATNLRRLRHDKGLSQDELACDAEMSRSYLAQLETGKYHASLKIIGRLAD
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLEVDPVEFLKGPAGR
HHCCCHHHHHCCCCCC
>Mature Secondary Structure 
ATRMDLRELFATNLRRLRHDKGLSQDELACDAEMSRSYLAQLETGKYHASLKIIGRLAD
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLEVDPVEFLKGPAGR
HHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA