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The map label for this gene is 82752284

Identifier: 82752284

GI number: 82752284

Start: 2734678

End: 2735247

Strand: Reverse

Name: 82752284

Synonym: SAB2582c

Alternate gene names: NA

Gene position: 2735247-2734678 (Counterclockwise)

Preceding gene: 82752285

Following gene: 82752279

Centisome position: 99.73

GC content: 32.28

Gene sequence:

>570_bases
TTGAATCTGAGTAAACAAATTAAAAAGTATAGGGAACGAGATGGTTATTCACAAGAATATCTTGCTGAAAAGTTATATGT
ATCTAGGCAGAGTATTTCTAATTGGGAAAATGACAAAAGCTTACCAGACATACATAACTTATTAATGATGTGCGAATTGT
TCAATGTAACTTTAGATGATTTAGTAAAAGGGACTATTCCATTTGTACCTGATATTAAAGTGCAACGAAGTCTTAACTTA
TGGGCATATGTGATGCTTATTTTCATGACACTAGCTGCAATTTTAACAGGACCTTTAATTGTTTATTGGAATTGGGCTTG
GGGTATAACGGTGATGGTCATTTATGGAATAGGTTATTATGCATCTATGAAAATAGAAGACTTTAAAAAAGTGCATAAAA
TGGATAACTACGATCGAATTGTTGCTTTTATGAATGGAAAAGATCCTAGTGAAGTACAAACGACTAAAGCTAGAAATACG
ATGACACATGCGCTTTCTATTATATCAGTAGTTGGTACACTCAGCCTCATAATTTTCCTTAGTGTGTATCTGGCAAATAA
GTTTTTATAA

Upstream 100 bases:

>100_bases
GTATGTCAAAACATTTAGTCAATCATACAGGTGACTTGATTTAACTTTATCTGATAGTCTGATTGTAATGATTGTACTAA
TTGACTGGAAGCGTATGTAA

Downstream 100 bases:

>100_bases
ATCATCGTGGTATGGCCTCATATTATTTATATTATCCAAAATAGCATAAAAAAATACCAACAAGATTTAGAACCTTGTTG
GTAATCAAAGCGATTCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Cro/CI Family; Xin-Antitoxin System Antitoxin Component Xre Family; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDDLVKGTIPFVPDIKVQRSLNL
WAYVMLIFMTLAAILTGPLIVYWNWAWGITVMVIYGIGYYASMKIEDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNT
MTHALSIISVVGTLSLIIFLSVYLANKFL

Sequences:

>Translated_189_residues
MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDDLVKGTIPFVPDIKVQRSLNL
WAYVMLIFMTLAAILTGPLIVYWNWAWGITVMVIYGIGYYASMKIEDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNT
MTHALSIISVVGTLSLIIFLSVYLANKFL
>Mature_189_residues
MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDDLVKGTIPFVPDIKVQRSLNL
WAYVMLIFMTLAAILTGPLIVYWNWAWGITVMVIYGIGYYASMKIEDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNT
MTHALSIISVVGTLSLIIFLSVYLANKFL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21866; Mature: 21866

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDD
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
LVKGTIPFVPDIKVQRSLNLWAYVMLIFMTLAAILTGPLIVYWNWAWGITVMVIYGIGYY
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHH
ASMKIEDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNTMTHALSIISVVGTLSLIIFL
HCCCHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYLANKFL
HHHHHHHCC
>Mature Secondary Structure
MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDD
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHH
LVKGTIPFVPDIKVQRSLNLWAYVMLIFMTLAAILTGPLIVYWNWAWGITVMVIYGIGYY
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHH
ASMKIEDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNTMTHALSIISVVGTLSLIIFL
HCCCHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVYLANKFL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA