| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82752263
Identifier: 82752263
GI number: 82752263
Start: 2716249
End: 2716803
Strand: Reverse
Name: 82752263
Synonym: SAB2561c
Alternate gene names: NA
Gene position: 2716803-2716249 (Counterclockwise)
Preceding gene: 82752264
Following gene: 82752262
Centisome position: 99.06
GC content: 32.43
Gene sequence:
>555_bases ATGAAAAAACAAGATATTTCAGTTAAAACTGTTGTTGCGATTGGTATAGGAGCAGCGGTATTTGTGATTTTAGGGCGTTT TGTTGTAATACCAACAGGTTTTCCTAATACGAATATAGAAACATCTTATGCATTTTTAGCATTAATATCTGCAATATTTG GGCCTTTTGCTGGTTTAATGACTGGATTAGTTGGACACGCTATTAAAGATTTCACGACATACGGTAGTGCTTGGTGGAGT TGGGTTATTTGTTCAGGAATTATAGGCTGTTTATATGGATGGATTGGCCTAAAATTAAATCTTTCTTCAGGCCGATTTTC TAGGAAATCGATGATTTATTTTAATATCGGTCAAATTATTGCGAATATTATTTGCTGGGCACTTATTGCACCAACATTAG ATATTTTGATTTATAACGAACCAGCTAACAAGGTTTATACACAAGGTGTTATCTCTGCAGTATTAAATATTATTTCTGTT GGTATTATTGGGACAATATTATTAAAAGCATATGCTTCATCTCAAATTAAAAAAGGTAGTTTACGTAAGAAATAG
Upstream 100 bases:
>100_bases TTTTCAGATTTATATCATATCGGTACTGGAAATGATTGGACGATTCATTTATCTAAAGCACCATCAATTTAATGAATTTT TTATGTAAGGAGTAATGAAG
Downstream 100 bases:
>100_bases TTATTTTGTTGAATCAGATATGTAAATGAATGTAGAAAGGTAATGATATATCATGACTGAACCAATTATCTCGTTCAAAG ACTTTAGTTTTCAATATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYAFLALISAIFGPFAGLMTGLVGHAIKDFTTYGSAWWS WVICSGIIGCLYGWIGLKLNLSSGRFSRKSMIYFNIGQIIANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISV GIIGTILLKAYASSQIKKGSLRKK
Sequences:
>Translated_184_residues MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYAFLALISAIFGPFAGLMTGLVGHAIKDFTTYGSAWWS WVICSGIIGCLYGWIGLKLNLSSGRFSRKSMIYFNIGQIIANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISV GIIGTILLKAYASSQIKKGSLRKK >Mature_184_residues MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYAFLALISAIFGPFAGLMTGLVGHAIKDFTTYGSAWWS WVICSGIIGCLYGWIGLKLNLSSGRFSRKSMIYFNIGQIIANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISV GIIGTILLKAYASSQIKKGSLRKK
Specific function: Unknown
COG id: COG4720
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0397 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009825 - InterPro: IPR022914 [H]
Pfam domain/function: PF07155 DUF1393 [H]
EC number: NA
Molecular weight: Translated: 19853; Mature: 19853
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYAFLALISAIFGPFAGLM CCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TGLVGHAIKDFTTYGSAWWSWVICSGIIGCLYGWIGLKLNLSSGRFSRKSMIYFNIGQII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHEEEEEHHHHH ANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISVGIIGTILLKAYASSQIKKGS HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LRKK CCCC >Mature Secondary Structure MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYAFLALISAIFGPFAGLM CCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TGLVGHAIKDFTTYGSAWWSWVICSGIIGCLYGWIGLKLNLSSGRFSRKSMIYFNIGQII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHEEEEEHHHHH ANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISVGIIGTILLKAYASSQIKKGS HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LRKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]