| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82752227
Identifier: 82752227
GI number: 82752227
Start: 2670733
End: 2672628
Strand: Reverse
Name: 82752227
Synonym: SAB2521c
Alternate gene names: NA
Gene position: 2672628-2670733 (Counterclockwise)
Preceding gene: 82752228
Following gene: 82752226
Centisome position: 97.45
GC content: 31.7
Gene sequence:
>1896_bases ATGGCTAAATATCGAGGGAAACCGTTTCAATTATATGTAAAGTTATCGTGTTCGACAATGATGGCGATTAGTATCATTTT AACGAATATCTTGCCGTACGATGCCCAAGCTGCATCTGAAAATGATACTGAAATTTCAAAAGAGATATTATCTAAGCAAG ATTTATTAGACAAAGTTGACAAAGCAAATCGTCAAATTGAGCAATTAAAACAGTTATCCGCTTCATCTAAAGCACATTAT AAAGCACAACTTAATGAAGCGAAAACAGCATTGCAAATAGATGAAATCATTAAACGAGCTAATGAGTTGGATAGCAAAGA CAATAAAGGCTCTCAAATTGAATTGAACGGTGAAAGTGATATAGACAGTAAATTAGATCAATTGCTTAAAGATTTAAATG AGGTTTCTTCAAAGGTTGATGGGGGTCAACAAAGTGGCGAGGACGATCTTAATGCAATGAAAAATGATATGTCACAAACG GCTACAACAAAACATGGAGAAAAAGATGATAAAAATGATGAAGTAATGGTAGATAAGGCGTTAGAAGACTTAGACCATTT GAATCAACAAATACGCAAATCGAAAGATACATCGAAAGATCCAGCAGTGTCTACAACAGATAATAATCATGAAGTAGCTA AAACGTCAAATAATGATGGTTCTGGACATGTTGTGTTAAATAAATTTCTTTCAAATGAAGAGAATCAAAGCCATAGTAAT CGACTCACTGATAAATTACAAGGAAGCGATAAAATTAATCATGCTATGATTGAAAAAATGGCTAAAAGTAATGCCTCAAC GCAACATTACACATATCATAAACTGAATACGTTACAATCTTTAGATCAACGTATTGCAAATACGCAACTTCCTAAAAATC AAAAATCAGACTTAATGAGCGAAGTAAATAAGACGAAAGAGCGTATAAAAAGTCAACGAAATATTATTTTGGAAGAACTT GCACGTAATAATGATAAAAAGTATGCTACACAAAGCATTTTAGAAAGTATATTTAATAAAGACGAGGCAGATAAAATTCT AAAAGATATACGTGTTGATGGTAAAACAGATCAACAAATTGCAGATCAAATTACTCGTCATATTGATCAACTATCTCTGA CAACGAGTGATGATTTATTAACGTCATTGATTGATCAATCACAAGATAAGTCGCTATTGATTTCTCAAATTTTACAAACG AAATTAGGAAAATCTGAAGCAGATAAATTGGCTAAAGATTGGACGAATAAAGGATTATCAAATCGCCAAATCGTTGACCA ATTGAAGAAACGTTTTGCATCAACTGGCGACACGTCTTCAGATGATATATTAAAAGCAATTTTGAATAATGCCAAAGATA AAAAACAAGCAATTGAAACGATTTTAGCAACACGTATAGAAAGACAAAAGGCAAAATTACTGGCAGATTTAATTACTAAA ATAGAAACAGATCAAAATAAAATTTTTAATTTAGTTAAATCGGCATTGAATGGTAAAGCGGATGATTTATTGAATTTACA AAAGAGACTCAATCAAACAAAAAAAGATATAGACTATGTTTTATCACCAATAGTAAATCGTCCAAGTTTACTAGATAGAT TGAATAAAAATGGGAAAACAACAGATTTAAATAAGTTAGCAAATTTAATGAATCAAGGATCAAATTTATTAGACAGTATT CCAGATATACCCACACCAAAGCCAGAAAAGACGTTAACACTTGGTAAAGGTAATGGATTGTTAAGTGGATTATTAAATGC TGATGGTAATGTATCTTTGCCTAAAGCGGGGGAAACGATAAAAGAACATTGGTTGCCGATATCTGTAATTGTTGGTGCAA TGGGTGTACTAATGATTTGGTTATCACGACGCAATAAGTTGAAAAATAAAGCATAA
Upstream 100 bases:
>100_bases CTAACAACAATAACTAGTTAGATAAGTGTAAAATTCTTGTAAACAGGTATATAATAGTATGTAATTCTTTTAAGGAAGTA AGTGAGAAAGGAGTAAGTTG
Downstream 100 bases:
>100_bases TTATATTGGGGGGGAAGAGCATCTATATATTTTTTTTAAGTATATAAGACGTCTTATTTCCCCCTTAAATTATTGTGAAG TATATGCAAAATGCAATGAA
Product: surface anchored protein
Products: NA
Alternate protein names: Cell-Wall-Anchored Protein SasF; LPXTG Family Cell Wall Surface Anchor Protein; Cell Wall Surface Anchor Family Protein
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MAKYRGKPFQLYVKLSCSTMMAISIILTNILPYDAQAASENDTEISKEILSKQDLLDKVDKANRQIEQLKQLSASSKAHY KAQLNEAKTALQIDEIIKRANELDSKDNKGSQIELNGESDIDSKLDQLLKDLNEVSSKVDGGQQSGEDDLNAMKNDMSQT ATTKHGEKDDKNDEVMVDKALEDLDHLNQQIRKSKDTSKDPAVSTTDNNHEVAKTSNNDGSGHVVLNKFLSNEENQSHSN RLTDKLQGSDKINHAMIEKMAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKSDLMSEVNKTKERIKSQRNIILEEL ARNNDKKYATQSILESIFNKDEADKILKDIRVDGKTDQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQT KLGKSEADKLAKDWTNKGLSNRQIVDQLKKRFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLADLITK IETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYVLSPIVNRPSLLDRLNKNGKTTDLNKLANLMNQGSNLLDSI PDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
Sequences:
>Translated_631_residues MAKYRGKPFQLYVKLSCSTMMAISIILTNILPYDAQAASENDTEISKEILSKQDLLDKVDKANRQIEQLKQLSASSKAHY KAQLNEAKTALQIDEIIKRANELDSKDNKGSQIELNGESDIDSKLDQLLKDLNEVSSKVDGGQQSGEDDLNAMKNDMSQT ATTKHGEKDDKNDEVMVDKALEDLDHLNQQIRKSKDTSKDPAVSTTDNNHEVAKTSNNDGSGHVVLNKFLSNEENQSHSN RLTDKLQGSDKINHAMIEKMAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKSDLMSEVNKTKERIKSQRNIILEEL ARNNDKKYATQSILESIFNKDEADKILKDIRVDGKTDQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQT KLGKSEADKLAKDWTNKGLSNRQIVDQLKKRFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLADLITK IETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYVLSPIVNRPSLLDRLNKNGKTTDLNKLANLMNQGSNLLDSI PDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA >Mature_630_residues AKYRGKPFQLYVKLSCSTMMAISIILTNILPYDAQAASENDTEISKEILSKQDLLDKVDKANRQIEQLKQLSASSKAHYK AQLNEAKTALQIDEIIKRANELDSKDNKGSQIELNGESDIDSKLDQLLKDLNEVSSKVDGGQQSGEDDLNAMKNDMSQTA TTKHGEKDDKNDEVMVDKALEDLDHLNQQIRKSKDTSKDPAVSTTDNNHEVAKTSNNDGSGHVVLNKFLSNEENQSHSNR LTDKLQGSDKINHAMIEKMAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKSDLMSEVNKTKERIKSQRNIILEELA RNNDKKYATQSILESIFNKDEADKILKDIRVDGKTDQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTK LGKSEADKLAKDWTNKGLSNRQIVDQLKKRFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLADLITKI ETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYVLSPIVNRPSLLDRLNKNGKTTDLNKLANLMNQGSNLLDSIP DIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70459; Mature: 70327
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYRGKPFQLYVKLSCSTMMAISIILTNILPYDAQAASENDTEISKEILSKQDLLDKVD CCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KANRQIEQLKQLSASSKAHYKAQLNEAKTALQIDEIIKRANELDSKDNKGSQIELNGESD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC IDSKLDQLLKDLNEVSSKVDGGQQSGEDDLNAMKNDMSQTATTKHGEKDDKNDEVMVDKA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LEDLDHLNQQIRKSKDTSKDPAVSTTDNNHEVAKTSNNDGSGHVVLNKFLSNEENQSHSN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH RLTDKLQGSDKINHAMIEKMAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKSDLMS HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EVNKTKERIKSQRNIILEELARNNDKKYATQSILESIFNKDEADKILKDIRVDGKTDQQI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH ADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKSEADKLAKDWTNKGLS HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC NRQIVDQLKKRFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLADLITK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYVLSPIVNRPSLLDRLNKNGKT HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC TDLNKLANLMNQGSNLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETI CHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCHHH KEHWLPISVIVGAMGVLMIWLSRRNKLKNKA HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKYRGKPFQLYVKLSCSTMMAISIILTNILPYDAQAASENDTEISKEILSKQDLLDKVD CCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KANRQIEQLKQLSASSKAHYKAQLNEAKTALQIDEIIKRANELDSKDNKGSQIELNGESD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC IDSKLDQLLKDLNEVSSKVDGGQQSGEDDLNAMKNDMSQTATTKHGEKDDKNDEVMVDKA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LEDLDHLNQQIRKSKDTSKDPAVSTTDNNHEVAKTSNNDGSGHVVLNKFLSNEENQSHSN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH RLTDKLQGSDKINHAMIEKMAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKSDLMS HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EVNKTKERIKSQRNIILEELARNNDKKYATQSILESIFNKDEADKILKDIRVDGKTDQQI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH ADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKSEADKLAKDWTNKGLS HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC NRQIVDQLKKRFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLADLITK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYVLSPIVNRPSLLDRLNKNGKT HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC TDLNKLANLMNQGSNLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKAGETI CHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCHHH KEHWLPISVIVGAMGVLMIWLSRRNKLKNKA HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA