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The map label for this gene is clfB

Identifier: 82752211

GI number: 82752211

Start: 2646630

End: 2649215

Strand: Reverse

Name: clfB

Synonym: SAB2505c

Alternate gene names: 82752211

Gene position: 2649215-2646630 (Counterclockwise)

Preceding gene: 82752212

Following gene: 82752210

Centisome position: 96.6

GC content: 39.06

Gene sequence:

>2586_bases
TTGAAAAAAAGAATTGATTATTTGTCGAATAAGCAGAATAAGTATTCGATTAGACGTTTTACAGTAGGTACCACATCAGT
AATAGTAGGGGCAACTATACTATTTGGGATAGGCAATCATCAAGCACAAGCTTCAGAACAATCGAACGATACAACGCAAT
CTTCGAAAAATAATGCAAGTGCAGATTCCGAAAAAAACAATACGATAGAAACACCTCAATTAAATACAACGGCTAATGAT
ACATCTGATATTAGTGCAAACACAAACAGTGCGAATGTAGATAGCACAGCAAAACCAATGTCTACACAAACGAGCAATAC
CACTACAACAGAGCCAGCTTCAACAAATGAAACACCTCAACCGACGGCAATTAAAGATCAAGCAACTGCTGCAAAAATGC
AAGATCAAACTGTTCCTCAAGAAGCAAATTCTCAAGTAGATAATAAAACAACGAATGATGCTAATAGCATAGCGACAAAC
AGCGAGCTTAAAAATCCTCAATCATTAGATTTACCACAATCATCACCACAAACGATTTCCAATGCGCAAGGAACTAGTAA
ACCAAGTGTTAGAACGAGAGCTGTACGTAGTCTTGCAGTTGCTGAACCTGTAGTAAATGCTGCTGATGCTAAAGGTACAA
ATGTAAATGATAAAGTTACGGCAAAAGATTTTCAATTAGAAAAGACTACATTTGACCCTAACCAAAGTGGTAATACTTTT
ATGGCGGCAAACTTTACAGTGACTGGACAAGTGAAATCAGGGGATTATTTTACAGCGAAGTTACCAGATAGTGTAACTGG
TAATGGAGACGTGGATTACTCTAATTCAAATAATACGATGCCAATTGCAGATATAGTAAACGATAAAAATGAAGTTGTAG
CAAAAGCGACATATGATATTTTGACTAAGACATATACATTTGTCTTTACAGATTATGTAAATGATAAGCAAAATATTAAT
GGGAAATTTTCATTACCATTATTTACAGACCGAGCAAAGGCACCTAAATCAGGAATATATGATGCGAATATTAATATTGC
GGATGAAATGTTTAATAATAAAATTACTTATAACTATAGTTCGCCAATTGCAGGAATTGATAAGCCAAATGGCGCGAACA
TTTCTTCTCAAATTATTGGTGTAGATACAGCTTCAGGTCAAAATACATACAAGCAAACGGTATTTGTTAACCCTAAGCAA
CGAGTTTTAGGTAATACGTGGGTGTATATTAAAGGTTACCAAGATAAAATCGAAGAAAGTAGCGGTAAAGTAAGTGCTAC
AGATACAAAACTGAGAATTTTTGAAGTGAATGATACATCTAAATTATCAGATAGCTACTATGCGGACCCAAATGACTCTA
ACCTTAAAGAAGTGACTGGTGAGTTTAATAATAGAATTTTTTATGAACATCCAAACGTAGCAAGTATTAATTTTGGTGAT
ATAAATAAAACGTATGTCGTTTTAGTTGAAGGTCACTATGATAATACTGGTAAAAACTTGAAAACACAGGTTATTCAAGA
AAATATTGACCCAGCGACAGGTAAAGACTACAGTATTTTCGGATGGAATAATGAGAATGTTGTACGTTATGGTGGTGGAA
GTGCTGATGGTGATTCAGCAGTAAATCCGAAAGATCCAACTCCAGGGCCACCGGTTGACCCAGAGCCAGAACCGGAGCCA
ACGCCGGATCCAGAACCAAGTCCAGACCCGGATCCGGAACCAACGCCAGATCCAGAGCCAAGCCCAGAACCAGATCCGGA
TTCGGATTCGGACAGTGACTCAGGCTCAGACAGCGACTCAGGTTCAGACAGTGACTCGGACTCAGATAGCAACTCGGACT
CAGACAGTGACTCGGACTCAGATAGCGATTCAGACTCAGACAGCGACTCGAATTCAGACAGCGATTCGGATTCAGACAGC
GATTCTGATTCAGATAGTGACTCAGATTCAGACAGCGATTTAGACTCAGACAGTGAGTCAGATTCAGACAGCGATTCGGA
CTCAGATAGCGATTCGGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGATTCGGACTCAGACA
GCGATTCGGATTCAGATAGCGACTCAGATTCAGATAGTGACTCAGATTCAGACAGCGATTCAGATTCAGACAGCGACTCA
GATTCAGATAGTGATTCAGACTCAGATAGTGACTCAGATTCAGACAGCGATTCGGATTCAGACAGTGAGTCAGATTCAGA
CAGCGACTCGGACTCAGATAGCGATTCGGATTCAGATAGCGATTCAGACTCAGACAGTGAGTCAGATTCAGATAGTGATT
CAGACTCAGACATCGATTCGGATTCAGATAGCGACTCCGATTCAAGAGTTACACCACCAAATAATGAACAGAAAGCACCA
TCAAATCCTAAAGGTGAAGTAAACCATTCTAATAAGGTATCAAAACAACACAAAACTGATGCTTTACCAGAAACAGGAGA
TAAGAGCGAAAACACAAATGCAACTTTATTTGGTGCAATGATGGCATTATTAGGATCATTACTATTGTTTAGAAAACGCA
AGCAAGATCATAAAGAAAAAGCGTAA

Upstream 100 bases:

>100_bases
AAAACAAATTTTACGTAATTTTTTTCGAAAAGCAATTGATATAATTCTTATTTCATTATACAATTTAGACTAATCTAGAA
ATTGAAATGGAGTAATATTT

Downstream 100 bases:

>100_bases
ATACTTTTTAGGCCGAATACATTTGTATTCGGTTTTTTGTTGAAAATGATTTTAAAGTGAATTGTTTAAGCGTAAAATGT
TGATAAAGTAGAATTAGAAA

Product: clumping factor B

Products: NA

Alternate protein names: Fibrinogen receptor B; Fibrinogen-binding protein B [H]

Number of amino acids: Translated: 861; Mature: 861

Protein sequence:

>861_residues
MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNASADSEKNNTIETPQLNTTAND
TSDISANTNSANVDSTAKPMSTQTSNTTTTEPASTNETPQPTAIKDQATAAKMQDQTVPQEANSQVDNKTTNDANSIATN
SELKNPQSLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTAKDFQLEKTTFDPNQSGNTF
MAANFTVTGQVKSGDYFTAKLPDSVTGNGDVDYSNSNNTMPIADIVNDKNEVVAKATYDILTKTYTFVFTDYVNDKQNIN
GKFSLPLFTDRAKAPKSGIYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQ
RVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTGEFNNRIFYEHPNVASINFGD
INKTYVVLVEGHYDNTGKNLKTQVIQENIDPATGKDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPEPEP
TPDPEPSPDPDPEPTPDPEPSPEPDPDSDSDSDSGSDSDSGSDSDSDSDSNSDSDSDSDSDSDSDSDSDSNSDSDSDSDS
DSDSDSDSDSDSDLDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
DSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDIDSDSDSDSDSRVTPPNNEQKAP
SNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA

Sequences:

>Translated_861_residues
MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNASADSEKNNTIETPQLNTTAND
TSDISANTNSANVDSTAKPMSTQTSNTTTTEPASTNETPQPTAIKDQATAAKMQDQTVPQEANSQVDNKTTNDANSIATN
SELKNPQSLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTAKDFQLEKTTFDPNQSGNTF
MAANFTVTGQVKSGDYFTAKLPDSVTGNGDVDYSNSNNTMPIADIVNDKNEVVAKATYDILTKTYTFVFTDYVNDKQNIN
GKFSLPLFTDRAKAPKSGIYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQ
RVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTGEFNNRIFYEHPNVASINFGD
INKTYVVLVEGHYDNTGKNLKTQVIQENIDPATGKDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPEPEP
TPDPEPSPDPDPEPTPDPEPSPEPDPDSDSDSDSGSDSDSGSDSDSDSDSNSDSDSDSDSDSDSDSDSDSNSDSDSDSDS
DSDSDSDSDSDSDLDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
DSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDIDSDSDSDSDSRVTPPNNEQKAP
SNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA
>Mature_861_residues
MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNASADSEKNNTIETPQLNTTAND
TSDISANTNSANVDSTAKPMSTQTSNTTTTEPASTNETPQPTAIKDQATAAKMQDQTVPQEANSQVDNKTTNDANSIATN
SELKNPQSLDLPQSSPQTISNAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTAKDFQLEKTTFDPNQSGNTF
MAANFTVTGQVKSGDYFTAKLPDSVTGNGDVDYSNSNNTMPIADIVNDKNEVVAKATYDILTKTYTFVFTDYVNDKQNIN
GKFSLPLFTDRAKAPKSGIYDANINIADEMFNNKITYNYSSPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQ
RVLGNTWVYIKGYQDKIEESSGKVSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTGEFNNRIFYEHPNVASINFGD
INKTYVVLVEGHYDNTGKNLKTQVIQENIDPATGKDYSIFGWNNENVVRYGGGSADGDSAVNPKDPTPGPPVDPEPEPEP
TPDPEPSPDPDPEPTPDPEPSPEPDPDSDSDSDSGSDSDSGSDSDSDSDSNSDSDSDSDSDSDSDSDSDSNSDSDSDSDS
DSDSDSDSDSDSDLDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
DSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDIDSDSDSDSDSRVTPPNNEQKAP
SNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAMMALLGSLLLFRKRKQDHKEKA

Specific function: Cell surface-associated protein implicated in virulence by promoting bacterial attachment to both alpha- and beta-chains of human fibrinogen and inducing the formation of bacterial clumps [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serine-aspartate repeat-containing protein (SDr) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011266
- InterPro:   IPR008966
- InterPro:   IPR011252
- InterPro:   IPR005877
- InterPro:   IPR019948
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF00746 Gram_pos_anchor; PF10425 SdrG_C_C; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 91880; Mature: 91880

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: PS50847 GRAM_POS_ANCHORING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNAS
CCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHEEECCCCHHHCCCCCCCCHHCCCCCCC
ADSEKNNTIETPQLNTTANDTSDISANTNSANVDSTAKPMSTQTSNTTTTEPASTNETPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTAIKDQATAAKMQDQTVPQEANSQVDNKTTNDANSIATNSELKNPQSLDLPQSSPQTIS
CCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCHHH
NAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTAKDFQLEKTTFDPNQSGNTF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCEE
MAANFTVTGQVKSGDYFTAKLPDSVTGNGDVDYSNSNNTMPIADIVNDKNEVVAKATYDI
EEEEEEEEEEEECCCEEEEECCCCCCCCCCEEECCCCCCEEHHHHHCCCHHEEHHHHHHH
LTKTYTFVFTDYVNDKQNINGKFSLPLFTDRAKAPKSGIYDANINIADEMFNNKITYNYS
HHHHEEEEEEECCCCCCCCCCEEECCEECCCCCCCCCCCEECCCCHHHHHHCCEEEEECC
SPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQRVLGNTWVYIKGYQDKIEES
CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHCCEEEEEECHHHHHHHC
SGKVSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTGEFNNRIFYEHPNVASINFGD
CCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCC
INKTYVVLVEGHYDNTGKNLKTQVIQENIDPATGKDYSIFGWNNENVVRYGGGSADGDSA
CCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCC
VNPKDPTPGPPVDPEPEPEPTPDPEPSPDPDPEPTPDPEPSPEPDPDSDSDSDSGSDSDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSDSDSDSDSNSDSDSDSDSDSDSDSDSDSNSDSDSDSDSDSDSDSDSDSDSDLDSDSES
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDIDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
MALLGSLLLFRKRKQDHKEKA
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRIDYLSNKQNKYSIRRFTVGTTSVIVGATILFGIGNHQAQASEQSNDTTQSSKNNAS
CCCHHHHHHCCCCCEEEEEEECCHHHHHHHHHHEEECCCCHHHCCCCCCCCHHCCCCCCC
ADSEKNNTIETPQLNTTANDTSDISANTNSANVDSTAKPMSTQTSNTTTTEPASTNETPQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PTAIKDQATAAKMQDQTVPQEANSQVDNKTTNDANSIATNSELKNPQSLDLPQSSPQTIS
CCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCHHH
NAQGTSKPSVRTRAVRSLAVAEPVVNAADAKGTNVNDKVTAKDFQLEKTTFDPNQSGNTF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCEE
MAANFTVTGQVKSGDYFTAKLPDSVTGNGDVDYSNSNNTMPIADIVNDKNEVVAKATYDI
EEEEEEEEEEEECCCEEEEECCCCCCCCCCEEECCCCCCEEHHHHHCCCHHEEHHHHHHH
LTKTYTFVFTDYVNDKQNINGKFSLPLFTDRAKAPKSGIYDANINIADEMFNNKITYNYS
HHHHEEEEEEECCCCCCCCCCEEECCEECCCCCCCCCCCEECCCCHHHHHHCCEEEEECC
SPIAGIDKPNGANISSQIIGVDTASGQNTYKQTVFVNPKQRVLGNTWVYIKGYQDKIEES
CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCHHHHHCCEEEEEECHHHHHHHC
SGKVSATDTKLRIFEVNDTSKLSDSYYADPNDSNLKEVTGEFNNRIFYEHPNVASINFGD
CCCEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCC
INKTYVVLVEGHYDNTGKNLKTQVIQENIDPATGKDYSIFGWNNENVVRYGGGSADGDSA
CCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCC
VNPKDPTPGPPVDPEPEPEPTPDPEPSPDPDPEPTPDPEPSPEPDPDSDSDSDSGSDSDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSDSDSDSDSNSDSDSDSDSDSDSDSDSDSNSDSDSDSDSDSDSDSDSDSDSDLDSDSES
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDIDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DSDSDSDSRVTPPNNEQKAPSNPKGEVNHSNKVSKQHKTDALPETGDKSENTNATLFGAM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
MALLGSLLLFRKRKQDHKEKA
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA