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The map label for this gene is 82752175

Identifier: 82752175

GI number: 82752175

Start: 2604412

End: 2604999

Strand: Reverse

Name: 82752175

Synonym: SAB2468c

Alternate gene names: NA

Gene position: 2604999-2604412 (Counterclockwise)

Preceding gene: 82752177

Following gene: 82752173

Centisome position: 94.99

GC content: 30.27

Gene sequence:

>588_bases
ATGACTATAGATCGACGTATTAGAAAATCACAAGTTGCAATGAGAAATGCATTTATTGAACTTTTACATCAACACCAATT
AGAAGAGATTACTGTGCAACAAATTGCAGATTTAGCTGATGTTAACCGTAGTACATTTTATACGCATTATTATGATAAAT
ATGATTTGCTTGAAAAATTAGAGGACCAGCAGTTGGAGGAAATAAGAGGCTTCATTCATGATGAGAAGTTAAATGGAGCA
GTTAAGTTATCCACGGATAACATACATAAAATTATGACCGTTTTAATAGAAATGATAGAAAAAGACATCGTATTTTATCA
ATTGATGTTTCGTATGGGTAAAGATTCAAATATCCACGAAAAACTTTATGATTTAATTATGTGTCATTTACAACGTTATA
AAAATGAAAATGATCAAATTAATGGTATACCATTTTCCTATTTCATGAGTTATGTTTCAGTTGCGGGATTGTCTTTGATA
AGACATTGGGTAGAAGATCCAAACCGTATAGACAAAGTTGACTTAATAAGGCATTTTAATACGATTGTCAATCAAGGGCC
AGCAACGATAATTAAAAATATACAATAA

Upstream 100 bases:

>100_bases
ATGGTAAACATTGTATGCCAATCATCAATGTTAGAGATTTGTAGGATAATGAACATAACGTTTATAATTGTTTATAATCA
TTGGGGAGGACTTGATATAA

Downstream 100 bases:

>100_bases
AATAAGGCAAGCCATGAAGCGAGAGTGGCTTGCCTTGCTAAATAACATAAGCTTATTAAATGATATCTTTATCAATAACA
TTATTGTTGGATTGCAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; TetR Family Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRGFIHDEKLNGA
VKLSTDNIHKIMTVLIEMIEKDIVFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSVAGLSLI
RHWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ

Sequences:

>Translated_195_residues
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRGFIHDEKLNGA
VKLSTDNIHKIMTVLIEMIEKDIVFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSVAGLSLI
RHWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ
>Mature_194_residues
TIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKLEDQQLEEIRGFIHDEKLNGAV
KLSTDNIHKIMTVLIEMIEKDIVFYQLMFRMGKDSNIHEKLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSVAGLSLIR
HWVEDPNRIDKVDLIRHFNTIVNQGPATIIKNIQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23172; Mature: 23041

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EDQQLEEIRGFIHDEKLNGAVKLSTDNIHKIMTVLIEMIEKDIVFYQLMFRMGKDSNIHE
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSVAGLSLIRHWVEDPNRIDKVDLIRHFN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TIVNQGPATIIKNIQ
HHHHCCHHHHHHCCC
>Mature Secondary Structure 
TIDRRIRKSQVAMRNAFIELLHQHQLEEITVQQIADLADVNRSTFYTHYYDKYDLLEKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EDQQLEEIRGFIHDEKLNGAVKLSTDNIHKIMTVLIEMIEKDIVFYQLMFRMGKDSNIHE
HHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLYDLIMCHLQRYKNENDQINGIPFSYFMSYVSVAGLSLIRHWVEDPNRIDKVDLIRHFN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TIVNQGPATIIKNIQ
HHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA