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The map label for this gene is 82752153

Identifier: 82752153

GI number: 82752153

Start: 2588130

End: 2588699

Strand: Direct

Name: 82752153

Synonym: SAB2445

Alternate gene names: NA

Gene position: 2588130-2588699 (Clockwise)

Preceding gene: 82752139

Following gene: 82752154

Centisome position: 94.37

GC content: 32.63

Gene sequence:

>570_bases
ATGATGGAAAGTAAATCCATAGATCCAAGAATCGTTAGAACCAAACAATTGCTTGTAGATGCTTTTCTTAAAATTTCTAG
AGAAAAGAAATTATCTCAAATTACAGTTAAAGATATCACTGATATTGCTACGCTAAATCGTGCAACATTTTACGCTCATT
TCACTGATAAAGAAGACCTCCTAGACTACACATTGTCTGTAACCATTTTAAAAGACTTGAATGATAACTTGAGCATTTCT
AATGTCATTAATGAAAAGGTACTGCGTAATATTTTCATTTCAATTGCGAGTTATATCAAAGATGCTGCAAAGTCTTGCGA
ATTAAATAGTGAAGCATTTTGCAACAAAGCACATCAACGTATTAATAATGAATTAGAAGATATTTTTGCGATTATGTTAG
AAAACAGCTACCCAGAGCATCAACGAGATATCATTGTAAATAGTGCGAGTTTTTTAGCAGCTGGTATATCAGGCTTAGCA
TTACATTGGTTTAACACGAGTCAAGAGACAGCCGATGTGTTTATCGATCGCAACCTTCCATTTTTAATTCATCATATAGC
ACATTTTTAA

Upstream 100 bases:

>100_bases
TAGGAGCGTATCAGCACTTACATATCATCAACACCATTGACAACATAATAGAAGATACTGATAATAAGTGTTAAAACAAC
AGATGTTAGGTAGTGAACAA

Downstream 100 bases:

>100_bases
TAAAACTTGGTATTTAGTCATGCATCTAGAAATCACTATGTGACTTAGGTTCATACTTGTGCACACAATAAAATTTAACG
TATTACGATTGATTAGCCGT

Product: TetR family regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR Family Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIATLNRATFYAHFTDKEDLLDYTLSVTILKDLNDNLSIS
NVINEKVLRNIFISIASYIKDAAKSCELNSEAFCNKAHQRINNELEDIFAIMLENSYPEHQRDIIVNSASFLAAGISGLA
LHWFNTSQETADVFIDRNLPFLIHHIAHF

Sequences:

>Translated_189_residues
MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIATLNRATFYAHFTDKEDLLDYTLSVTILKDLNDNLSIS
NVINEKVLRNIFISIASYIKDAAKSCELNSEAFCNKAHQRINNELEDIFAIMLENSYPEHQRDIIVNSASFLAAGISGLA
LHWFNTSQETADVFIDRNLPFLIHHIAHF
>Mature_189_residues
MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIATLNRATFYAHFTDKEDLLDYTLSVTILKDLNDNLSIS
NVINEKVLRNIFISIASYIKDAAKSCELNSEAFCNKAHQRINNELEDIFAIMLENSYPEHQRDIIVNSASFLAAGISGLA
LHWFNTSQETADVFIDRNLPFLIHHIAHF

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21586; Mature: 21586

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIATLNRATFYAHFTDKEDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
LDYTLSVTILKDLNDNLSISNVINEKVLRNIFISIASYIKDAAKSCELNSEAFCNKAHQR
HHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
INNELEDIFAIMLENSYPEHQRDIIVNSASFLAAGISGLALHWFNTSQETADVFIDRNLP
HHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHEEEEECCCCHHHHEEECCCCH
FLIHHIAHF
HHHHHHHCC
>Mature Secondary Structure
MMESKSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIATLNRATFYAHFTDKEDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
LDYTLSVTILKDLNDNLSISNVINEKVLRNIFISIASYIKDAAKSCELNSEAFCNKAHQR
HHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
INNELEDIFAIMLENSYPEHQRDIIVNSASFLAAGISGLALHWFNTSQETADVFIDRNLP
HHHHHHHHHHHHHCCCCCCHHHHEEECCHHHHHHHHHHHEEEEECCCCHHHHEEECCCCH
FLIHHIAHF
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA