| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is pgcA [H]
Identifier: 82752080
GI number: 82752080
Start: 2504564
End: 2506327
Strand: Direct
Name: pgcA [H]
Synonym: SAB2371
Alternate gene names: 82752080
Gene position: 2504564-2506327 (Clockwise)
Preceding gene: 82752072
Following gene: 82752081
Centisome position: 91.32
GC content: 34.64
Gene sequence:
>1764_bases TTGTCTTGGGGCTGTGTTTTTTACTTTTGGGGCGTATTTCTTTATAATTCATTACATAAATGTAAGGGCTTTAGTTTTCA TGTTTTATTAAGTCTAACTGAGATTTTGAAAGGATGTTTAGCAACAATGGATAAAGAATTATGGATAGAAAGAGCTAATG ATAGTTTAGTTAAACATTTTTATGAGCAGCAATCTGGCATTGAACAGCGAGATGGTTTTGAAAGTAAATTAACGTTTGGT ACTGCGGGTATACGCGGAAAATTCGGTCTTGGTGAAGGTCGACTTAATAAGTTTACTATTGAAAAATTGGCATTAGGTTT AGCGCGTTATTTAAATGCCCAAACAAACAATCCAACGATAGTCATTCATTATGATATTAGACATCTTTCAACTGAATTCG CCCAAATTATTGCTAATGTATTAGCAAACCATCAAATAACAGTTTATTTACCTGATACATATAAAACGACACCGGAATTA TCGTTCGCGGTGCGCAATCTTAATACTGCTGCTGGCATTATGATTACAGCAAGTCATAATCCGAAAGACTATAACGGCAT TAAAGTATATGGTTCTGATGGCGCGCAACTATCGACTGATGCATCTGAGCTTGCAAGTCGTTATATCGAAGAAGTTGGCG ATCCATTACAGATTGATATACCTATTTCAAAACAAAATACATCTTATATCAAGCCTTTCCCGAAATCTGTAACTGATGAC TATATGAAACACATTCAAAATATGATTGGCTATATTCCTAAATCTGATTTACAAGTTGTGTTCACTAGTTTGCATGGTAC AAGTGTTCCGATTGTACCTGAGTTATTACAATCTTTGAATTTCAATCAATTTAATCTTGTAGAAGCACAATGTAAACCTG ATCCGAATTTCAGCTCAGTTCAAAGTGCTAATCCTGAAGATCATCGCGCTTTTGATCAAGCAGTCGAACTTGCAAATAAA AGTCATGCAGACTTATTAATATCAACTGACCCAGATGCAGATCGACTTGGTATTGCTGAATGTGATGCACACGGTCATAT CACATATTTTAATGGCAACCAAATTGGTGCGTTGTTACTTAATTATCGTATTCAACAAACGTCTCAATTACGTCACCGAT TAATGATTCAATCTATTGTAAGTAGTGAGTTAACAAAGTCATTAGCACGCTATAATAATGTTGAATACAAAGAGGTGCTG ACGGGATTTAAATTTATTGCTCAGGAAATAAGGCAACTGGACGATCATCAAAATATGATTTTCGCCTTTGAAGAGAGTTA CGGTTTTCTATCAGAGCCTTTTGTACGTGATAAAGATGCCGTACAAATTGTGCCACTCATTATAAAATACGCTTCTGAGT TAAAATTATATGGCAAAACATTGAAAGATGCATTAGAACAGATTTATCAAACTGTTGGTAGACATGAGGATACATTATTC TCACATACGCTAGAAGGATTAGAAGGGAAAAAGAAAATTAATGCAATAATGACCAAATTCCGTTCAAATCCACCGCAAGA GATTCAAGGACTGAAAGTGAAAGCAATTGAAGATTATTTAACTAGCGAGGTTTATCAGTTGGATAAAGATACAACGTCGC AGATTAATTCTCCTAAGTCAAATGTTATTCGCGTGTTATTTGACGAAGGATTTATCGCTTTACGTCCTTCTGGTACTGAA CCTAAAATTAAATTATATGTGTCGTTAAAATGTCCGAATTTTGATGATGTAGCTCAAAAAATTAATGCGATGATTTTTAG CTAA
Upstream 100 bases:
>100_bases AATTTTTCACTTATTATCAATTATACATTATAAAAATTTATTGAACGCTCTACTCCATGCATTTTCATACACATCTATTA TATAATACTTGTGAAAAGTA
Downstream 100 bases:
>100_bases TTAAAAATTTTATACATCGAAATATTACATTTCATTTTATACTTATCAGCCCTTTTGAAACTAGAATCCTTATGTTTTCG CGTTTTGAAGGGGCTAATTT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MSWGCVFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSLVKHFYEQQSGIEQRDGFESKLTFG TAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPEL SFAVRNLNTAAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPLQIDIPISKQNTSYIKPFPKSVTDD YMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLQSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELANK SHADLLISTDPDADRLGIAECDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVL TGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDALEQIYQTVGRHEDTLF SHTLEGLEGKKKINAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKSNVIRVLFDEGFIALRPSGTE PKIKLYVSLKCPNFDDVAQKINAMIFS
Sequences:
>Translated_587_residues MSWGCVFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSLVKHFYEQQSGIEQRDGFESKLTFG TAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPEL SFAVRNLNTAAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPLQIDIPISKQNTSYIKPFPKSVTDD YMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLQSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELANK SHADLLISTDPDADRLGIAECDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVL TGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDALEQIYQTVGRHEDTLF SHTLEGLEGKKKINAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKSNVIRVLFDEGFIALRPSGTE PKIKLYVSLKCPNFDDVAQKINAMIFS >Mature_586_residues SWGCVFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSLVKHFYEQQSGIEQRDGFESKLTFGT AGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPELS FAVRNLNTAAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPLQIDIPISKQNTSYIKPFPKSVTDDY MKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLQSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELANKS HADLLISTDPDADRLGIAECDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVLT GFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDALEQIYQTVGRHEDTLFS HTLEGLEGKKKINAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKSNVIRVLFDEGFIALRPSGTEP KIKLYVSLKCPNFDDVAQKINAMIFS
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in the S.aureus membrane, which is also use
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=564, Percent_Identity=32.8014184397163, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI31377548, Length=542, Percent_Identity=31.9188191881919, Blast_Score=227, Evalue=2e-59, Organism=Escherichia coli, GI1788361, Length=264, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71993870, Length=565, Percent_Identity=29.9115044247788, Blast_Score=202, Evalue=6e-52, Organism=Caenorhabditis elegans, GI71993878, Length=320, Percent_Identity=31.25, Blast_Score=134, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323934, Length=555, Percent_Identity=28.2882882882883, Blast_Score=172, Evalue=9e-44, Organism=Drosophila melanogaster, GI20129809, Length=563, Percent_Identity=28.9520426287744, Blast_Score=216, Evalue=5e-56, Organism=Drosophila melanogaster, GI24651977, Length=442, Percent_Identity=30.316742081448, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI24653722, Length=430, Percent_Identity=30.9302325581395, Blast_Score=186, Evalue=5e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 66273; Mature: 66142
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWGCVFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSLVKHF CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHH YEQQSGIEQRDGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTI HHHHCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE VIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPELSFAVRNLNTAAGIMITASHN EEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECCC PKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPLQIDIPISKQNTSYIKPFPKSVTDD CCCCCCEEEECCCCCEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHH YMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLQSLNFNQFNLVEAQCKPDPNFSSV HHHHHHHHHHCCCCCCHHEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCC QSANPEDHRAFDQAVELANKSHADLLISTDPDADRLGIAECDAHGHITYFNGNQIGALLL CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCEEEEECCCCCEEHHH NYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE FAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDALEQIYQTVGRHEDTLF EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SHTLEGLEGKKKINAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKS HHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHH NVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS HEEEEEEECCEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure SWGCVFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSLVKHF CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHH YEQQSGIEQRDGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTI HHHHCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE VIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPELSFAVRNLNTAAGIMITASHN EEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEECCC PKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPLQIDIPISKQNTSYIKPFPKSVTDD CCCCCCEEEECCCCCEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHH YMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLQSLNFNQFNLVEAQCKPDPNFSSV HHHHHHHHHHCCCCCCHHEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCC QSANPEDHRAFDQAVELANKSHADLLISTDPDADRLGIAECDAHGHITYFNGNQIGALLL CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCEEEEECCCCCEEHHH NYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE FAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDALEQIYQTVGRHEDTLF EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH SHTLEGLEGKKKINAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKS HHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCHH NVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS HEEEEEEECCEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA