| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is sbi
Identifier: 82752013
GI number: 82752013
Start: 2428895
End: 2430205
Strand: Direct
Name: sbi
Synonym: SAB2298
Alternate gene names: 82752013
Gene position: 2428895-2430205 (Clockwise)
Preceding gene: 82751985
Following gene: 82752015
Centisome position: 88.56
GC content: 31.35
Gene sequence:
>1311_bases ATGAAAAATAAATATATCTCGAAGTTGCTAGTTGGGGCAGCAACAATTACTTTAGCTACAATGATTTCAAATGGGGAAGC AAAAGCGAGTGAAAACACGCAACAAACTTCAACTAAGCACCAAACAACTCAAAACAACTACATAACAGATCAACAAAAAG CTTTTTATCAAGTATTACATCTAAAAGGTATCACAGAAGAACAACGTAACCAATACATCAAAACATTACGCGAACACCCA GAACGTGCACAAGAAGTATTCTCTGAATCACTTAAAGACAGCAAGAACCCAGACCGACGTGTTGCACAACAAAACGCTTT TTACAATGTTCTTAAAAATGATAACTTAACTGAACAAGAAAAAAATAATTACATTGCACAAATTAAAGAAAACCCTGATA GAAGCCAACAAGTTTGGGTAGAATCAGTACAATCTTCTAAAGCTAAAGAACGTCAAAATATTGAAAATGCGGATAAAGCA ATTAAAGATTTCCAAGATAACAAAGCACCACACGATAAATCAGCAGCATATGAAGCTAACTCAAAATTACCTAAAGATTT ACGCGATAAAAATAACCGCTTTGTAGAAAAAGTTTCAATTGAAAAAGCAATCGTTCGTCATGATGAGCGTGTGAAATCAG CAAATGATGCAATCTCAAAATTAAATGAAAAAGATTCAATTGAAAACAGACGTTTAGCACAACGTGAAGTTAACAAAGCA CCTATGGATGTAAAAGAGCATTTACATAAACAATTAGACGCATTAGTAGCTCAAAAAGATGCTGAAAAGAAAGTGGCGCC AAAAGTTGAGGCTCCTCAAATTCAATCACCACAAATTGAAAAACCTAAAGCAGAATCACCAAAAGTTGAAGTCCCTCAAA TTCAATCACCAAAAGTTGAGGTTCCTCAATCTAAATTACTAGGTTACTACCAATCATTAAAAGATTCATTTAACTATGGT TACAAGTATTTAACAGATACTTATAAAAGCTATAAAGAAAAATATGATACAGCAAAGTACTACACTGATAAATATTTTAA ATATAAAGGTACAATAGATAAAACTGTACAATCAGTTTTTGGTAATGGATACAAATCATACATCCAACCATTAAAAGTTG AAGATCAAAAAAATTATGTATCTAAATCATATGCACAAGTAAGAAACTATGTAACTGAAACTTTAAACACAGGTAAAGTA TTATATGCATTTTATCAAAATCCAAAATTAGTTAATGCTGCTATAACTACAGCTGAAACAGCAACATCAATCAAAAATAT CTTCTCTAGTTTTACATCATTTTTTAAATAA
Upstream 100 bases:
>100_bases TAACATTAGTTAATAATTAGTTAATTTCCATTTGTATTCTCATGTGATAAATTCTAAAAGCATACAATAAATTTAATATG TAAAAAGAAAGGGAATACAC
Downstream 100 bases:
>100_bases TTTTCGTAATAAACCGTGATTAAAAAGAACCGTTGATTCTCAATCGAATCTGCGGTTCTTTTTCATTTTCCATCAATTAA ATGTTTCTTCGCTATTTGTC
Product: immunoglobulin G-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYITDQQKAFYQVLHLKGITEEQRNQYIKTLREHP ERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKA IKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA PMDVKEHLHKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYG YKYLTDTYKSYKEKYDTAKYYTDKYFKYKGTIDKTVQSVFGNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVTETLNTGKV LYAFYQNPKLVNAAITTAETATSIKNIFSSFTSFFK
Sequences:
>Translated_436_residues MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYITDQQKAFYQVLHLKGITEEQRNQYIKTLREHP ERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKA IKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA PMDVKEHLHKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYG YKYLTDTYKSYKEKYDTAKYYTDKYFKYKGTIDKTVQSVFGNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVTETLNTGKV LYAFYQNPKLVNAAITTAETATSIKNIFSSFTSFFK >Mature_436_residues MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYITDQQKAFYQVLHLKGITEEQRNQYIKTLREHP ERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKA IKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA PMDVKEHLHKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYG YKYLTDTYKSYKEKYDTAKYYTDKYFKYKGTIDKTVQSVFGNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVTETLNTGKV LYAFYQNPKLVNAAITTAETATSIKNIFSSFTSFFK
Specific function: Interacts with components of both the adaptive and innate host immune system, thereby protecting the cell against the host immune response [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Note=Found on the cell surface in some strains of S.aureus [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the immunoglobulin-binding protein sbi family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009063 - InterPro: IPR021657 - InterPro: IPR003132 [H]
Pfam domain/function: PF02216 B; PF11621 Sbi-IV [H]
EC number: NA
Molecular weight: Translated: 50200; Mature: 50200
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYITDQQKAFYQVLH CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQE HCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHH KNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEAN HCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC SKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC PMDVKEHLHKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYTDKYFKYKGTIDKTVQSVF CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH GNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVTETLNTGKVLYAFYQNPKLVNAAITTAET CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHH ATSIKNIFSSFTSFFK HHHHHHHHHHHHHHCC >Mature Secondary Structure MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYITDQQKAFYQVLH CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHH LKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQE HCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHH KNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEAN HCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHC SKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC PMDVKEHLHKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYTDKYFKYKGTIDKTVQSVF CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH GNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVTETLNTGKVLYAFYQNPKLVNAAITTAET CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHH ATSIKNIFSSFTSFFK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA