Click here to switch to the map view.

The map label for this gene is ureF

Identifier: 82751880

GI number: 82751880

Start: 2295772

End: 2296461

Strand: Direct

Name: ureF

Synonym: SAB2164

Alternate gene names: 82751880

Gene position: 2295772-2296461 (Clockwise)

Preceding gene: 82751879

Following gene: 82751881

Centisome position: 83.71

GC content: 32.61

Gene sequence:

>690_bases
ATGATTGATCATACACACTTAAGATTATTTCAGTTCTGTGATTCACAGTTTCCAACTGGTGCTTTCAGTCATTCATTTGG
TCTTGAAACATATATTCAACGAAATATAATTCATGATGATCATACTTTTATTGCTTGGTTAAAAATGTTTTTACAAGAGC
AACTTACCTATTCTGATGGTTTAGCCATGCGTTTAGTTTATGATGCATTGGAAAATGATGATACACAAAAAGTATTACAC
ATAGATAAGCTGATGTTTGTTCAAAACTTACCTAAAGAAACACGTGTTGGTGCAAAACAAATGGGGACTCGCATAGTTAA
ATTGGCTTTAGAACTTTATAATAGCCCATGGATTGCTTGGTATCATCAACAAATGCAAGATAAGAAAGCAAAGTTAAATC
CAGCTATTTGTTTTACTATGCTAGGCCATTATTTAGGTGTAGATATTGAAACGATTATTGATTACTATTTATATCAAAAT
GTTTCAAGTTTAACTCAAAATGCTGTTCGTGCTATTCCACTTGGACAAACTGCTGGTCAAAAGATAGTTACTCACATGAT
TCCTTATATAGAAGAAACAAGAAAGCAGATTTTCGAATTAAAAGAAGCAGATTTTGGCATGACAGCGCCTGGTTTAGAAC
TAAATCAAATGGCGCATGAGAACGTCAATGTTAGAATTTTCATATCATAG

Upstream 100 bases:

>100_bases
TATGATTATTTAGTTGAAGATTTATTAAAAAGTTTAGGCATCCCATATGTTCGAGAAGACCGTAAAGTTAATAAGGCTTT
CAGACATATAGGACATTCTC

Downstream 100 bases:

>100_bases
GAGGTTATAATTGTGGCAAATCCGATTAAAATTGGTATTGGTGGTCCTGTAGGTGCAGGTAAAACACAATTAATTGAAAA
AGTTGTAAAACGTCTTTCAA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLH
IDKLMFVQNLPKETRVGAKQMGTRIVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQN
VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS

Sequences:

>Translated_229_residues
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLH
IDKLMFVQNLPKETRVGAKQMGTRIVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQN
VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
>Mature_229_residues
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDGLAMRLVYDALENDDTQKVLH
IDKLMFVQNLPKETRVGAKQMGTRIVKLALELYNSPWIAWYHQQMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQN
VSSLTQNAVRAIPLGQTAGQKIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 26560; Mature: 26560

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
CCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRIVKLALELYNSPWIAW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
YHQQMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MIDHTHLRLFQFCDSQFPTGAFSHSFGLETYIQRNIIHDDHTFIAWLKMFLQEQLTYSDG
CCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
LAMRLVYDALENDDTQKVLHIDKLMFVQNLPKETRVGAKQMGTRIVKLALELYNSPWIAW
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
YHQQMQDKKAKLNPAICFTMLGHYLGVDIETIIDYYLYQNVSSLTQNAVRAIPLGQTAGQ
HHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KIVTHMIPYIEETRKQIFELKEADFGMTAPGLELNQMAHENVNVRIFIS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA