| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is fmhB
Identifier: 82751850
GI number: 82751850
Start: 2271060
End: 2272325
Strand: Reverse
Name: fmhB
Synonym: SAB2134c
Alternate gene names: 82751850
Gene position: 2272325-2271060 (Counterclockwise)
Preceding gene: 82751852
Following gene: 82751849
Centisome position: 82.86
GC content: 33.73
Gene sequence:
>1266_bases ATGGAAAAGATGCATATCACTAATCAGGAACATGACGCATTTGTTAAATCTCACCCAAATGGAGATTTATTACAATTAAC GAAATGGGCAGAAACAAAGAAATTAACTGGATGGTACGCGCGAAGAATCGCTGTAGGTCGTGATGGTGAAATTCAGGGTG TTGCGCAGTTACTTTTTAAAAAAGTACCTAAATTACCTTATACGCTATGTTATATTTCACGTGGTTTTGTTGTTGATTAT AGTAATAAAGAGGCGTTAAATGCATTGTTAGACAGTGCAAAAGAAATTGCTAAAGCTGAGAAAGCTTATGCAATTAAAAT CGATCCTGATGTTGAAGTCGATAAAGGTACAGATGCTTTGCAAAATTTGAAAGCGCTTGGTTTTAAACATAAAGGATTTA AAGAAGGTTTATCAAAAGACTACATCCAACCACGTATGACTATGATTACACCAATTGATAAAAATGATGATGAGTTATTA AATAGTTATGAACGCCGAAATCGTTCAAAAGTGCGCTTGGCATTAAAACGAGGTACGACAGTAGAACGATCTGATAGAGA AGGTTTAAAAACATTTGCTGAATTAATGAAAATCACTGGGGAACGCGATGGCTTCTTAACGCGTGATATTAGTTACTTTG AAAATATTTATGATGCGTTGCATGAAGATGGAGATGCTGAACTATTTTTAGTAAAGTTGGATCCAAAAGAAAATATAGCG AAAGTAAATCAAGAATTGAATGAACTTCATGCCGAAATTGCTAAATGGCAGCAGAAGATGGAAACATCTGAAAAGCAAGC TAAAAAAGCGCAAAATATGATTAATGATGCGCAAAATAAAATTGCTAAAAATGAAGATTTAAAACGAGACCTAGAAGCTT TAGAAAAGGAACATCCTGAAGGTATTTATCTTTCTGGTGCACTATTAATGTTTGCTGGCTCAAAATCATATTACTTATAT GGTGCGTCTTCTAATGAATTTAGAGATTTTTTACCAAATCATCATATGCAGTATACGATGATGAAGTATGCACGTGAACA TGGTGCAACAACTTACGATTTCGGTGGTACAGATAATGATCCAGATAAAGACTCAGAACATTATGGCTTATGGGCATTTA AAAAAGTGTGGGGAACATACTTAAGTGAAAAGATTGGTGAATTTGATTATGTATTGAATCAGCCATTGTACCAATTAATT GAGCAAGTTAAACCGCGTTTAACAAAAGCTAAAATTAAAATATCTCGTAAATTAAAACGAAAATAG
Upstream 100 bases:
>100_bases AAAATAAGAGTTCAAATCATACACAAGCTCTGAATCGACACTATAAGATACAAACTGTATAATTAAAGGTATTGTTAAAT AGAAGGAGATATCATAAATC
Downstream 100 bases:
>100_bases ATTAACGACTGAAATCTGAACGCTCATAAGACTGTCATTTGCGTTCAGATTTTTTTACACAATATAGAATGGTTGAGTAA AATATTTTTGAATATAGTGA
Product: methicillin resistance factor peptidoglycan pentaglycine interpeptide biosynthetic protein
Products: NA
Alternate protein names: Factor essential for expression of methicillin resistance X [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEIQGVAQLLFKKVPKLPYTLCYISRGFVVDY SNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELL NSYERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIA KVNQELNELHAEIAKWQQKMETSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLY GASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLI EQVKPRLTKAKIKISRKLKRK
Sequences:
>Translated_421_residues MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEIQGVAQLLFKKVPKLPYTLCYISRGFVVDY SNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELL NSYERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIA KVNQELNELHAEIAKWQQKMETSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLY GASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLI EQVKPRLTKAKIKISRKLKRK >Mature_421_residues MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEIQGVAQLLFKKVPKLPYTLCYISRGFVVDY SNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELL NSYERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIA KVNQELNELHAEIAKWQQKMETSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLY GASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLI EQVKPRLTKAKIKISRKLKRK
Specific function: Catalyzes the incorporation of the first glycine of the pentaglycine interpeptide bridge, which is characteristic of the S.aureus peptidoglycan. This glycine is added to the epsilon-amino group of the L-lysine of the membrane-bound lipid II intermediate (
COG id: COG2348
COG function: function code V; Uncharacterized protein involved in methicillin resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the femABX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR003447 [H]
Pfam domain/function: PF02388 FemAB [H]
EC number: NA
Molecular weight: Translated: 48553; Mature: 48553
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEIQGVAQLLFK CCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDAL HCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHH QNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELLNSYERRNRSKVRLALKRGTT HHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHEEEHHHCCCC VERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIA CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH KVNQELNELHAEIAKWQQKMETSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC GIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDND CEEEECEEEEEECCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCC PDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKISRKLKR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC K C >Mature Secondary Structure MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEIQGVAQLLFK CCCCCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDAL HCCCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHH QNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELLNSYERRNRSKVRLALKRGTT HHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHEEEHHHCCCC VERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIA CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH KVNQELNELHAEIAKWQQKMETSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC GIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDND CEEEECEEEEEECCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCC PDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKISRKLKR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA