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The map label for this gene is yobV [H]

Identifier: 82751800

GI number: 82751800

Start: 2232866

End: 2233795

Strand: Reverse

Name: yobV [H]

Synonym: SAB2083c

Alternate gene names: 82751800

Gene position: 2233795-2232866 (Counterclockwise)

Preceding gene: 82751803

Following gene: 82751798

Centisome position: 81.45

GC content: 25.48

Gene sequence:

>930_bases
ATGAAAATTAGTCGGTTAATTAGTATTATTTTGATTTTGAATGAGAGAAAACGTATAAGTGCTCATGAGTTGTCAGAATT
AATGGAAGTATCACAACGTACAATTTATCGAGATATAGAAGCGATAAATATAGCTGGAATACCTGTTTATTCTATTCCAG
GTGTCGGTGGTGGCTTTGAAATTATGGAAAATTTTAAAATAGATAAAAATACATTTACTGAAAATGAATCGGCAAGTCTT
TTAATTAGTAACTCTAATTTTCCGGAAAAACTAAAGAATAATGATTTTTTTAACACAAATCTAAAAATTAAAAGTTTAAT
ACCGAAAGATAAGCTAAATTCAATAGAAACACAAGTAGAACAATTTCAATTAGATTCTAATCATTGGAATGAATTAAGAA
ATATAGATGAACAACTGATTAAATTTAAAAACGCTATACAAAACAATCAGGTATTAAAAATTAAATATATTAATCATTTA
GGAAATAAAACAGAAAGAGAAGTCAAACCATATCAACTTATTTTAAAAGCAGGACATTGGTATTGTTATGTTTATTGTTA
TTTAAGAGATGATTTTAGATTACTTAAATTAAATCGAGTTATACATTTGCAAGAATTAGAAAGCAAATTTATTAAAAAAA
TGTATATAGACCCATTATTATCTACAAATAGAATTTTTGAAAAATTAAAAATGACAATTAAACTTCGCGTACACGAATCA
ATTGTTGAACGTTTACTAGATTTCTGTGATTACGATAGCTTTAGGCAAGAAAATAATCGATATTATGTAGTTGACTTCCC
ATTCATCGACAACTCATATTACTTTGGATTAATTTTAAGTTTTGGAGATAAGTGTGAAGTTATAGAACCAACTGAAATTA
GAAATAAAATGAAACAAACAATTAAAAAAATGGCGGATAATTATAAGTAG

Upstream 100 bases:

>100_bases
CATTCTTCATAATTATCCTCCTGTAGTTTAATTTGATATCATTATAAGAAATTAAAGTGACCAACTGTATGGCAACAATT
AAAAGACAGGTGGAATTTAT

Downstream 100 bases:

>100_bases
TCAGATTACAATAATTAAATGAGGAGAAACTCGCTGAATGCCTTGGTAAATCGATTTTTAAATAATCGAGAACTTATCAA
GGGTGATGTGGTCTGCGGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKISRLISIILILNERKRISAHELSELMEVSQRTIYRDIEAINIAGIPVYSIPGVGGGFEIMENFKIDKNTFTENESASL
LISNSNFPEKLKNNDFFNTNLKIKSLIPKDKLNSIETQVEQFQLDSNHWNELRNIDEQLIKFKNAIQNNQVLKIKYINHL
GNKTEREVKPYQLILKAGHWYCYVYCYLRDDFRLLKLNRVIHLQELESKFIKKMYIDPLLSTNRIFEKLKMTIKLRVHES
IVERLLDFCDYDSFRQENNRYYVVDFPFIDNSYYFGLILSFGDKCEVIEPTEIRNKMKQTIKKMADNYK

Sequences:

>Translated_309_residues
MKISRLISIILILNERKRISAHELSELMEVSQRTIYRDIEAINIAGIPVYSIPGVGGGFEIMENFKIDKNTFTENESASL
LISNSNFPEKLKNNDFFNTNLKIKSLIPKDKLNSIETQVEQFQLDSNHWNELRNIDEQLIKFKNAIQNNQVLKIKYINHL
GNKTEREVKPYQLILKAGHWYCYVYCYLRDDFRLLKLNRVIHLQELESKFIKKMYIDPLLSTNRIFEKLKMTIKLRVHES
IVERLLDFCDYDSFRQENNRYYVVDFPFIDNSYYFGLILSFGDKCEVIEPTEIRNKMKQTIKKMADNYK
>Mature_309_residues
MKISRLISIILILNERKRISAHELSELMEVSQRTIYRDIEAINIAGIPVYSIPGVGGGFEIMENFKIDKNTFTENESASL
LISNSNFPEKLKNNDFFNTNLKIKSLIPKDKLNSIETQVEQFQLDSNHWNELRNIDEQLIKFKNAIQNNQVLKIKYINHL
GNKTEREVKPYQLILKAGHWYCYVYCYLRDDFRLLKLNRVIHLQELESKFIKKMYIDPLLSTNRIFEKLKMTIKLRVHES
IVERLLDFCDYDSFRQENNRYYVVDFPFIDNSYYFGLILSFGDKCEVIEPTEIRNKMKQTIKKMADNYK

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36722; Mature: 36722

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISRLISIILILNERKRISAHELSELMEVSQRTIYRDIEAINIAGIPVYSIPGVGGGFE
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCHH
IMENFKIDKNTFTENESASLLISNSNFPEKLKNNDFFNTNLKIKSLIPKDKLNSIETQVE
HHHCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCEECCCEEEEECCCCHHHHHHHHHHH
QFQLDSNHWNELRNIDEQLIKFKNAIQNNQVLKIKYINHLGNKTEREVKPYQLILKAGHW
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCHHHCCHHHHHHHCCCE
YCYVYCYLRDDFRLLKLNRVIHLQELESKFIKKMYIDPLLSTNRIFEKLKMTIKLRVHES
EEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
IVERLLDFCDYDSFRQENNRYYVVDFPFIDNSYYFGLILSFGDKCEVIEPTEIRNKMKQT
HHHHHHHHHCCCHHHHCCCCEEEEEEEEECCCEEEEEEEECCCCCCEECHHHHHHHHHHH
IKKMADNYK
HHHHHHCCC
>Mature Secondary Structure
MKISRLISIILILNERKRISAHELSELMEVSQRTIYRDIEAINIAGIPVYSIPGVGGGFE
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCCCHH
IMENFKIDKNTFTENESASLLISNSNFPEKLKNNDFFNTNLKIKSLIPKDKLNSIETQVE
HHHCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCEECCCEEEEECCCCHHHHHHHHHHH
QFQLDSNHWNELRNIDEQLIKFKNAIQNNQVLKIKYINHLGNKTEREVKPYQLILKAGHW
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHCCCCCHHHCCHHHHHHHCCCE
YCYVYCYLRDDFRLLKLNRVIHLQELESKFIKKMYIDPLLSTNRIFEKLKMTIKLRVHES
EEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
IVERLLDFCDYDSFRQENNRYYVVDFPFIDNSYYFGLILSFGDKCEVIEPTEIRNKMKQT
HHHHHHHHHCCCHHHHCCCCEEEEEEEEECCCEEEEEEEECCCCCCEECHHHHHHHHHHH
IKKMADNYK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]