| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is abgB [H]
Identifier: 82751734
GI number: 82751734
Start: 2149011
End: 2150195
Strand: Reverse
Name: abgB [H]
Synonym: SAB2017c
Alternate gene names: 82751734
Gene position: 2150195-2149011 (Counterclockwise)
Preceding gene: 82751736
Following gene: 82751733
Centisome position: 78.4
GC content: 36.79
Gene sequence:
>1185_bases ATGAGTGAAAAACAACAAATTCTCGATTATATAGAAACAAATAAATATAGTTATATCGAAATTAGTCATAGAATTCATGA ACGTCCTGAACTTGGTAATGAAGAAATATTTGCGTCTCGAACTTTAATAGATCGTTTGAAAGAACATGATTTTGAAATTG AAACCGAGATTGCTGGGCATGCAACTGGGTTTATAGCGACATATGATTCGGGTCTTGACGGGCCAGCTATAGGTTTTTTA GCAGAATACGATGCTTTGCCAGGATTGGGTCATGCTTGTGGTCATAATATCATTGGAACTGCAAGTGTGCTTGGTGCAAT TGGTTTGAAGCAAGTGATTGACCAAATTGGTGATAAAGTAGTCGTTCTCGGATGTCCAGCTGAAGAAGGTGGGGAAAATG GTAGCGCTAAAGCTTCTTATGTCAAGGCTGGTGTGATTGATCAAATAGACATTGCCTTAATGATTCATCCGGGAAATGAA ACTTATAAAACGATTGATACTTTGGCAGTGGATGTTTTAGATGTTAAATTTTACGGAAAAAGTGCTCATGCCTCTGAAAA TGCAGATGAAGCGTTAAATGCATTAGACGCTATGATTAGTTATTTTAATGGTGTAGCACAACTACGACAACATATTAAAA AAGATCAACGTGTGCATGGTGTGATTTTAGATGGCGGGAAAGCAGCTAATATTATTCCAGACTATACACATGCTCGTTTT TATACTAGAGCAATGACGCGTAAAGAATTGGATATATTAACAGAAAAAGTAAATCAAATCGCACGTGGAGCTGCGATACA GACTGGTTGTGATTATGAATTTGGTCCAATTCAAAACGGTGTGAATGAATTTATTAAAACGCCGAAATTAGATGATTTAT TCGCTAAATATGCTGAAGAAGTTGGTGAAGCAGTTATTGATGATGATTTTGGTTATGGCTCTACGGATACAGGGAACGTA AGTCATGTTGTGCCAACAATACATCCTCATATTAAAATAGGATCACGTAATTTAGTAGGACATACGCATAGATTTAGAGA AGCAGCTGCGAGTGTACATGGTGATGAAGCATTAATTAAAGGTGCTAAAATAATGGCGTTGATGGGGTTAGAGTTAATTA CAAATCAAGACGTTTATCAAGACATTATTGAAGAGCATGCGCATTTGAAAGGGAATGGGAAGTAA
Upstream 100 bases:
>100_bases CATGAGATAAAACCGATAGAATAAGTAATAATTCATTTTGAAAGAACAAAATATTGTGGATGATTAAAATGAGTGCAGGG TAAAAGGGAGATAGTAAAAA
Downstream 100 bases:
>100_bases TGACAAATAATGGTAATGAGCCGAACTTAACGTTAAGTGATTTATATGACAAAGATGTTGTCTATACGTCAAGACCTTCG TATATATCGAATCCATGGTT
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFL AEYDALPGLGHACGHNIIGTASVLGAIGLKQVIDQIGDKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNE TYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRVHGVILDGGKAANIIPDYTHARF YTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDTGNV SHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQDVYQDIIEEHAHLKGNGK
Sequences:
>Translated_394_residues MSEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFL AEYDALPGLGHACGHNIIGTASVLGAIGLKQVIDQIGDKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNE TYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRVHGVILDGGKAANIIPDYTHARF YTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDTGNV SHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQDVYQDIIEEHAHLKGNGK >Mature_393_residues SEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLA EYDALPGLGHACGHNIIGTASVLGAIGLKQVIDQIGDKVVVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNET YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRVHGVILDGGKAANIIPDYTHARFY TRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDTGNVS HVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIKGAKIMALMGLELITNQDVYQDIIEEHAHLKGNGK
Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI58082085, Length=393, Percent_Identity=35.6234096692112, Blast_Score=219, Evalue=4e-57, Organism=Escherichia coli, GI1787598, Length=464, Percent_Identity=26.9396551724138, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017145 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 42958; Mature: 42827
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGH CCHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC ATGFIATYDSGLDGPAIGFLAEYDALPGLGHACGHNIIGTASVLGAIGLKQVIDQIGDKV CCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEE VVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNETYKTIDTLAVDVLDVKFYGK EEEECCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHEEEEEECC SAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRVHGVILDGGKAANIIPDYTHARF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH YTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH VGEAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIK HHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHH GAKIMALMGLELITNQDVYQDIIEEHAHLKGNGK HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGH CHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCC ATGFIATYDSGLDGPAIGFLAEYDALPGLGHACGHNIIGTASVLGAIGLKQVIDQIGDKV CCEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCEE VVLGCPAEEGGENGSAKASYVKAGVIDQIDIALMIHPGNETYKTIDTLAVDVLDVKFYGK EEEECCCCCCCCCCCCCHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHEEEEEECC SAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRVHGVILDGGKAANIIPDYTHARF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHH YTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH VGEAVIDDDFGYGSTDTGNVSHVVPTIHPHIKIGSRNLVGHTHRFREAAASVHGDEALIK HHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHH GAKIMALMGLELITNQDVYQDIIEEHAHLKGNGK HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 9829935 [H]