| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is ydbS [H]
Identifier: 82751675
GI number: 82751675
Start: 2089086
End: 2089577
Strand: Reverse
Name: ydbS [H]
Synonym: SAB1957c
Alternate gene names: 82751675
Gene position: 2089577-2089086 (Counterclockwise)
Preceding gene: 82751676
Following gene: 82751674
Centisome position: 76.19
GC content: 33.74
Gene sequence:
>492_bases ATGAGTGATTATAATTTTATGTCACCACATGCTAAAAAAGTGATGAGGTTAAGCGCTGTGCTGTTTTGGATACCCATAGC GCTGGTACTTTTAATAGCATTTAATATTTTGAACTGGCTATTTTGGGAGATTTTAGATAACTATATATCCATTGTTAGTA GTGTGATTATAATATTACTTGTTGCTGTTTTCACGCTTGTCATAGCGCCAGTCTATCGATATAAGCACTGCAGATATGCG TTTGAAAAACACCATTTGCGTGTACGAAACGGCATTTTATTTTTGGATGAAAAGGTAATACCATATTTTCGTATTCAAAA TATTGATATCGATGTTGGTCCTATAATGAGACGCTATCGATTAGCAACTTTGACACTTTATACAGCGGGTGGTCAAGCTG AAATTGAATTAATAGATAGAAGTGAAGCACGTAGATTGAAACGATGGTTAAATAACGAGAGACATTTAGAAAACAATAAA AATGAGGAATAA
Upstream 100 bases:
>100_bases ATTGTTGCTAAAGGTGTGACGAATGAATCAATTGAACTTAAATATGCCAGTAGTAAAGATGTGCAAATATTGAAGGCGTG GTATTTGAGAGGTGAAAATG
Downstream 100 bases:
>100_bases TCAATGATACATGGAATTGGTGTAGATTTAATCGAAATCGATCGAATAAAAGTGTTATATAGTAAGCAACCAAAATTGGT TGAGCGGATTTTAACTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSDYNFMSPHAKKVMRLSAVLFWIPIALVLLIAFNILNWLFWEILDNYISIVSSVIIILLVAVFTLVIAPVYRYKHCRYA FEKHHLRVRNGILFLDEKVIPYFRIQNIDIDVGPIMRRYRLATLTLYTAGGQAEIELIDRSEARRLKRWLNNERHLENNK NEE
Sequences:
>Translated_163_residues MSDYNFMSPHAKKVMRLSAVLFWIPIALVLLIAFNILNWLFWEILDNYISIVSSVIIILLVAVFTLVIAPVYRYKHCRYA FEKHHLRVRNGILFLDEKVIPYFRIQNIDIDVGPIMRRYRLATLTLYTAGGQAEIELIDRSEARRLKRWLNNERHLENNK NEE >Mature_162_residues SDYNFMSPHAKKVMRLSAVLFWIPIALVLLIAFNILNWLFWEILDNYISIVSSVIIILLVAVFTLVIAPVYRYKHCRYAF EKHHLRVRNGILFLDEKVIPYFRIQNIDIDVGPIMRRYRLATLTLYTAGGQAEIELIDRSEARRLKRWLNNERHLENNKN EE
Specific function: Unknown
COG id: COG3402
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0699 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005182 [H]
Pfam domain/function: PF03703 DUF304 [H]
EC number: NA
Molecular weight: Translated: 19362; Mature: 19231
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYNFMSPHAKKVMRLSAVLFWIPIALVLLIAFNILNWLFWEILDNYISIVSSVIIILL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVFTLVIAPVYRYKHCRYAFEKHHLRVRNGILFLDEKVIPYFRIQNIDIDVGPIMRRYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCHHHHHHHHH LATLTLYTAGGQAEIELIDRSEARRLKRWLNNERHLENNKNEE HHHHEEEECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SDYNFMSPHAKKVMRLSAVLFWIPIALVLLIAFNILNWLFWEILDNYISIVSSVIIILL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAVFTLVIAPVYRYKHCRYAFEKHHLRVRNGILFLDEKVIPYFRIQNIDIDVGPIMRRYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEECCCCCHHHHHHHHH LATLTLYTAGGQAEIELIDRSEARRLKRWLNNERHLENNKNEE HHHHEEEECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]