Click here to switch to the map view.

The map label for this gene is agrA

Identifier: 82751641

GI number: 82751641

Start: 2047633

End: 2048349

Strand: Direct

Name: agrA

Synonym: SAB1923

Alternate gene names: 82751641

Gene position: 2047633-2048349 (Clockwise)

Preceding gene: 82751640

Following gene: 82751649

Centisome position: 74.66

GC content: 31.38

Gene sequence:

>717_bases
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGATCCA
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACGTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAACATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACGCTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Upstream 100 bases:

>100_bases
TGATAATGCAGACAATGTCTTATTAGATACAATTATCGAGAATGGTTTCTTTATTCAAAAGGTTGAAATTATTAACAACT
AACCATAAGGATGTGAATGT

Downstream 100 bases:

>100_bases
TAAGATAATAAAGTCAGTTAACGGCGTATTCAATTGTAAATCTTGTTGGGTTTTAACAAGATAACTAGCAAATGCACTGT
ATAGCTGGCTTTTTAATTTT

Product: accessory gene regulator A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKERCYASVRNVKKI

Sequences:

>Translated_238_residues
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKERCYASVRNVKKI
>Mature_238_residues
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKERCYASVRNVKKI

Specific function: Required for high-level post-exponential phase expression of a series of secreted proteins [H]

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27925; Mature: 27925

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDI
CEEEEECCCCHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHCCCCCCEEEEEEE
QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
EEECCCCCEECCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCHHHHHHHH
IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCEEEEEECCCEE
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKERCYASVRNVKKI
EEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDI
CEEEEECCCCHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHHHHCCCCCCEEEEEEE
QLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRI
EEECCCCCEECCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCHHHHHHHH
IDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQI
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCEEEEEECCCEE
EFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKERCYASVRNVKKI
EEEECHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA