Click here to switch to the map view.

The map label for this gene is 82751597

Identifier: 82751597

GI number: 82751597

Start: 2012900

End: 2013955

Strand: Reverse

Name: 82751597

Synonym: SAB1876c

Alternate gene names: NA

Gene position: 2013955-2012900 (Counterclockwise)

Preceding gene: 82751599

Following gene: 82751596

Centisome position: 73.43

GC content: 29.83

Gene sequence:

>1056_bases
ATGAAAAATAAAAAACGTGTTTTAATAGCGTCATCATTATCATGTGCAATTTTATTGTTATCAGCAGCAACGACTCAAGC
AAATTCAGCTCATAAAGACTCGCAAGACCAAAATAAGAAAGAACATGTTGATAAGTCTCAACAAAAAGACAAACGTAATG
TTACTAATAAAGATAAAAATTCAACAGTACCTGATGATATTGGGAAAAACGGTAAAATCACAAAACGAACTGAAACTGTA
TATGATGAGAAAACAAATATACTCCAAAATTTACAATTCGACTTTATCGATGATCCAACTTATGACAAGAATGTATTACT
TGTTAAAAAACAAGGCTCAATTCATTCAAATTTAAAATTTGAATCTCATAAAGAAGAAAAAAATTCAAATTGGTTAAAGT
ATCCAAGTGAGTACCATGTAGATTTTCAAGTAAAAAGGAATCGTAAAACTGAAATATTAGACCAATTGCCGAAAAATAAA
ATTTCAACTGCGAAAGTAGACAGTACATTTTCATATAGCTCAGGTGGTAAATTCGATTCAACGAAAGGTATTGGACGAAC
TTCATCAAATAGCTACTCCAAAACGATTAGTTATAATCAGCAAAAATATGACACAATTGCCATCGGTAAAAATAATAACT
GGCATGTACACTGGTCAGTTATTGCGAATGACTTGAAGTATGGTGGAGAAGTGAAAAATAGAAATGATGAATTATTATTC
TATAGAAATACGAGAATTGCTACTGTAGAAAACCCTGAACTAAGCTTTGCTTCAAAATATAGATACCCGGCATTAGTAAG
AAGTGGCTTTAATCCAGAATTTTTAACTTATTTATCTAATGAAAAGTCAAATGAGAAAACGCAATTTGAAGTAACATACA
CACGAAATCAAGATATTTTGAAAAACAGACCTGGAATACATTATGCACCTCCAATTTTAGAAAAAAATAAAGATGGTCAA
AGATTAATTGTCACTTATGAAGTTGATTGGAAAAATAAAACAGTTAAAGTCGTTGATAAATATTCTGATGACAATAAACC
TTATAAAGAAGGATAA

Upstream 100 bases:

>100_bases
ATTTAATAAATAGTTAAATATATATTCTCTGTTTTTGTGATATTATTCACATGTCGATACATATCAACAAATATCAATCA
TACGAAAGAAGGTTATAACA

Downstream 100 bases:

>100_bases
TATTGAAAGGGCGGATTACTAATGATTAAACAATTATACAAAAACATCACAATTTGTAGTTTAACAATATCTACTGCATT
AACTGTATTTCCGGCAACTT

Product: leukocidin S subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETV
YDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQKYDTIAIGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQ
RLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG

Sequences:

>Translated_351_residues
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETV
YDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQKYDTIAIGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQ
RLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
>Mature_351_residues
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETV
YDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK
ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQKYDTIAIGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQ
RLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aerolysin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001340
- InterPro:   IPR016183 [H]

Pfam domain/function: PF07968 Leukocidin [H]

EC number: NA

Molecular weight: Translated: 40503; Mature: 40503

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN
CCCCCEEEEECCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
STVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKF
CCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCCCCCCC
ESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDS
CCCHHCCCCCCEECCCEEEEEEEEECCCHHHHHHHCCCCCCCEEECCCCEECCCCCCCCC
TKGIGRTSSNSYSKTISYNQQKYDTIAIGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEECHHHCCCCCCCCCCCEEE
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDIL
EECCEEEEECCCCCCHHHHCCCHHHHHCCCCHHHHHEECCCCCCCCEEEEEEEECCCHHH
KNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
HCCCCCCCCCCHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKN
CCCCCEEEEECCCCEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
STVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKF
CCCCHHCCCCCCEEEHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCCCCCCC
ESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDS
CCCHHCCCCCCEECCCEEEEEEEEECCCHHHHHHHCCCCCCCEEECCCCEECCCCCCCCC
TKGIGRTSSNSYSKTISYNQQKYDTIAIGKNNNWHVHWSVIANDLKYGGEVKNRNDELLF
CCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEECHHHCCCCCCCCCCCEEE
YRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDIL
EECCEEEEECCCCCCHHHHCCCHHHHHCCCCHHHHHEECCCCCCCCEEEEEEEECCCHHH
KNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
HCCCCCCCCCCHHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA