| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751594
Identifier: 82751594
GI number: 82751594
Start: 2008883
End: 2009965
Strand: Reverse
Name: 82751594
Synonym: SAB1873c
Alternate gene names: NA
Gene position: 2009965-2008883 (Counterclockwise)
Preceding gene: 82751596
Following gene: 82751592
Centisome position: 73.29
GC content: 27.61
Gene sequence:
>1083_bases ATGAAATTTAAGTCATTGATTACAACAACTTTAGCATTAGGTGTTTTAGCATCAACAGGTGCAAACTTTAATAATAATGA AGCGTCTGCCGCAGCTAAGCCATTAGATAAATCATCAAGTTCGTTACACCATGGATATTCTAAAGTCCATGTTCCATATG CAATCACTGTGAACGGTACAAGCCAAAATATTTTATCAAGCTTAACATTTAATAAGAATCAAAATATTAGTTATAAAGAT TTAGAGGATAGAGTTAAATCAGTTTTAAAATCAGACAGAGGTATTAGTGATATAGATTTAAGACTATCGAAGCAAGCGAA ATATACTGTTTACTTTAAAAATGGAGCAAAAAGAGTTATCGATTTGAAAGCAGGTATTTACACAGCTGATTTAATTAATA CAAGTGAAATTAAAGCTATTAATATTAACGTAGATACTAAAAAGCAAGTTGAAGATAAAAAGAAGGATAAAGCAAATTAC CAAGTTCCATACACAATTACTGTGAACGGTACAAGCCAAAATATTTTATCAAACTTAACATTTAATAAGAATCAAAATAT TAGTTACAAAGATTTAGAGGGTAAAGTTAAATCAGTTTTAGAATCAAATAGAGGTATTATCGATGTTGATTTAAGACTAT CAAAGCAAGCGAAATATACAGTTAATTTTAAAAATGGAACGAAGAAAGTTATTGATTTGAAAGCAGGTATTTACACAGCG AATTTAATAAATTCAAGTGATATTAAAAGTATCGATATTAACGTAGATACAAAAAAACATGTCGAAAATAAAGCTAAAAG AAACTATCAAGTTCCATATTCAATTAATTTAAATGGCACATCAACACCAATTTTATCTAAATTAAAACTGTCTCAAAAGG AATTAATTAGTTACAAATATTTAAATGACAAAGTGAAATCTGTATTAAAAAGTGAAAGAGGCATCAGTGACCTTGACTTA AAATTTGCGAAACAAGCAAAATATACAGTACATTTCAAAAATGGAAAGAAACAAGTAGTGAATTTAAAATCAGACATCTT TACACCTAATTTATTTAGTGCCAAAGATATTAAAAAGCATTGA
Upstream 100 bases:
>100_bases AGATAATTTATTATTAATATTCAGTTAATTCAAAAAATAGAGAAAGTCTGGCTATAATAAAGTTGCAATTACGAATTACA CAAAAAAGGAGAGATAATTT
Downstream 100 bases:
>100_bases TATTGATGTAAAAGCACCCCCCTTAATCAAAAAAATAAATAATCTAATAATGTGAAATTCCCCAGTACAATAAATAATTT GAAAACTTAGTTTCAAATGA
Product: cell surface protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKFKSLITTTLALGVLASTGANFNNNEASAAAKPLDKSSSSLHHGYSKVHVPYAITVNGTSQNILSSLTFNKNQNISYKD LEDRVKSVLKSDRGISDIDLRLSKQAKYTVYFKNGAKRVIDLKAGIYTADLINTSEIKAININVDTKKQVEDKKKDKANY QVPYTITVNGTSQNILSNLTFNKNQNISYKDLEGKVKSVLESNRGIIDVDLRLSKQAKYTVNFKNGTKKVIDLKAGIYTA NLINSSDIKSIDINVDTKKHVENKAKRNYQVPYSINLNGTSTPILSKLKLSQKELISYKYLNDKVKSVLKSERGISDLDL KFAKQAKYTVHFKNGKKQVVNLKSDIFTPNLFSAKDIKKH
Sequences:
>Translated_360_residues MKFKSLITTTLALGVLASTGANFNNNEASAAAKPLDKSSSSLHHGYSKVHVPYAITVNGTSQNILSSLTFNKNQNISYKD LEDRVKSVLKSDRGISDIDLRLSKQAKYTVYFKNGAKRVIDLKAGIYTADLINTSEIKAININVDTKKQVEDKKKDKANY QVPYTITVNGTSQNILSNLTFNKNQNISYKDLEGKVKSVLESNRGIIDVDLRLSKQAKYTVNFKNGTKKVIDLKAGIYTA NLINSSDIKSIDINVDTKKHVENKAKRNYQVPYSINLNGTSTPILSKLKLSQKELISYKYLNDKVKSVLKSERGISDLDL KFAKQAKYTVHFKNGKKQVVNLKSDIFTPNLFSAKDIKKH >Mature_360_residues MKFKSLITTTLALGVLASTGANFNNNEASAAAKPLDKSSSSLHHGYSKVHVPYAITVNGTSQNILSSLTFNKNQNISYKD LEDRVKSVLKSDRGISDIDLRLSKQAKYTVYFKNGAKRVIDLKAGIYTADLINTSEIKAININVDTKKQVEDKKKDKANY QVPYTITVNGTSQNILSNLTFNKNQNISYKDLEGKVKSVLESNRGIIDVDLRLSKQAKYTVNFKNGTKKVIDLKAGIYTA NLINSSDIKSIDINVDTKKHVENKAKRNYQVPYSINLNGTSTPILSKLKLSQKELISYKYLNDKVKSVLKSERGISDLDL KFAKQAKYTVHFKNGKKQVVNLKSDIFTPNLFSAKDIKKH
Specific function: Binds various plasma and ECM-proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 6 MAP repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005298 - InterPro: IPR016091 [H]
Pfam domain/function: PF03642 MAP [H]
EC number: NA
Molecular weight: Translated: 40209; Mature: 40209
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKSLITTTLALGVLASTGANFNNNEASAAAKPLDKSSSSLHHGYSKVHVPYAITVNGT CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHCCCEEEEEEEEEEECCC SQNILSSLTFNKNQNISYKDLEDRVKSVLKSDRGISDIDLRLSKQAKYTVYFKNGAKRVI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCEEE DLKAGIYTADLINTSEIKAININVDTKKQVEDKKKDKANYQVPYTITVNGTSQNILSNLT EEECCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCEECCEEEEECCCHHHHHHHCC FNKNQNISYKDLEGKVKSVLESNRGIIDVDLRLSKQAKYTVNFKNGTKKVIDLKAGIYTA CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCEEEEEEECCEEEE NLINSSDIKSIDINVDTKKHVENKAKRNYQVPYSINLNGTSTPILSKLKLSQKELISYKY EECCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHH LNDKVKSVLKSERGISDLDLKFAKQAKYTVHFKNGKKQVVNLKSDIFTPNLFSAKDIKKH HHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEECCCEEEEEEHHHCCCCCCCCCHHCCCC >Mature Secondary Structure MKFKSLITTTLALGVLASTGANFNNNEASAAAKPLDKSSSSLHHGYSKVHVPYAITVNGT CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHCCCEEEEEEEEEEECCC SQNILSSLTFNKNQNISYKDLEDRVKSVLKSDRGISDIDLRLSKQAKYTVYFKNGAKRVI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCEEE DLKAGIYTADLINTSEIKAININVDTKKQVEDKKKDKANYQVPYTITVNGTSQNILSNLT EEECCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCEECCEEEEECCCHHHHHHHCC FNKNQNISYKDLEGKVKSVLESNRGIIDVDLRLSKQAKYTVNFKNGTKKVIDLKAGIYTA CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCCEEEEEEECCEEEE NLINSSDIKSIDINVDTKKHVENKAKRNYQVPYSINLNGTSTPILSKLKLSQKELISYKY EECCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHH LNDKVKSVLKSERGISDLDLKFAKQAKYTVHFKNGKKQVVNLKSDIFTPNLFSAKDIKKH HHHHHHHHHHHHCCCCCCCHHHHCCCEEEEEEECCCEEEEEEHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2726469 [H]