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The map label for this gene is ssb-p [H]

Identifier: 82751466

GI number: 82751466

Start: 1878918

End: 1879343

Strand: Reverse

Name: ssb-p [H]

Synonym: SAB1745c

Alternate gene names: 82751466

Gene position: 1879343-1878918 (Counterclockwise)

Preceding gene: 82751467

Following gene: 82751465

Centisome position: 68.53

GC content: 38.97

Gene sequence:

>426_bases
ATGTTAAACAGAATAGTATTAGTAGGGCGATTAACAAAAGACCCAGAATTAAGAAGCACGCCAAATGGCGTAAATGTAGG
GACATTCACATTAGCAGTAAACAGAACATTTACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAAAAACAAGCCGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGACTACAAACACGT
AACTACGAAAATAAAGACGGACAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAGGACAAACTCAAACTGGTAATAATCCGTTCGACAATACCGAAG
AAGACTTTTCTGACTTACCGTTCTGA

Upstream 100 bases:

>100_bases
AAATCTCTAACATTAATAAATTGAGTCAAAAACAAATCGCAGAAGCACACCAAAAATTAGATGCGGGATTAAAACAATTG
GATAGTGAGGAGAAATAATA

Downstream 100 bases:

>100_bases
TTGGAATGATTAGATGCCAATAATTACTAGTTATATCACTCAAGATGACGGTACAACAACAGTTGTCATCTCGGGCGTCG
AATTAGGTAATAAAGAAACA

Product: single strand DNA binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MLNRIVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
NYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQGQTQTGNNPFDNTEEDFSDLPF

Sequences:

>Translated_141_residues
MLNRIVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
NYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQGQTQTGNNPFDNTEEDFSDLPF
>Mature_141_residues
MLNRIVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
NYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQGQTQTGNNPFDNTEEDFSDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair. This specific ssb is encoded in the L54a prophage and may be involved in phage replication [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=117, Percent_Identity=36.7521367521368, Blast_Score=76, Evalue=9e-16,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15880; Mature: 15880

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRIVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN
CCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECEECCCCCCCCCCEEEEEEECCHHHH
VKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQG
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QTQTGNNPFDNTEEDFSDLPF
CCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MLNRIVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN
CCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECEECCCCCCCCCCEEEEEEECCHHHH
VKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQG
HHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QTQTGNNPFDNTEEDFSDLPF
CCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA