| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751426
Identifier: 82751426
GI number: 82751426
Start: 1846844
End: 1848856
Strand: Reverse
Name: 82751426
Synonym: SAB1705c
Alternate gene names: NA
Gene position: 1848856-1846844 (Counterclockwise)
Preceding gene: 82751427
Following gene: 82751425
Centisome position: 67.41
GC content: 35.87
Gene sequence:
>2013_bases ATGTACAAAATACAAGACATTGAAACGCGAATAAATAAAAAAACAGTTGATATCGGCGACATAGGTTGTCGCTTCTACAC AGAAGACGAGAACACAGCTTATGTCAGAATCGGTATCAACGACGAAAAAGGCAGAATCAACTTCAAAGAAAGTAATTTGA CCCCTAAGTTACATCTGTTCGCGGAAGATGGTTCTATATTCAAAAATGAGCCAGTTTTAATCGACGATAATGTAAAAGGG TTCCTTACCTACAAGATACCCAAAAACGTTATTAAACACGTCGGTATGGTGCGTTGTAAGTTGTTTTTAGAGAATGACCA CGAAAGAATACACGTTGCAAACTTCCATTTCTACATTATCGATAGTGGTATAGATAACGCAGTGCAAAAAGAGGTGTCTA TCACATTAGTTGAGGACACTGTAAAAAGAATTATCCGTACAAACGCTAGTGAGTTACTAGGAGACGACTTCAAAGAAACG TTAAACACAACTGCTAAGCAATACATCGCTGACAATGCAGACAAGTTTAAGGGCGAGCGTGGAGAACGTGGAGAAAAAGG AGAAGCGGGCGAACGAGGTGCGCAAGGCATTGCGGGAACCAGCGCTGATATAACTGACGCAATTGGTAACTTCTCTAATT TAAAAGATGTTGTCAATTTACCTTTACAACCAAATTTTGTTGAAGAGGTTAACAAGTTATCTACAACTAAAGGAGATATG ACAGTTAGTATCGTACATGCACCATCTCAAACATTCCATGTAGTGCAACCAATAAGTAGTAGTCGAGCTTTAAGAGTTTG GTTCAATAAAAACCAGAAAGATGACTATATCATTTTTAGAGAGACAGAAATAGGAGACTACGCCAACGAAAACAAATCGA TCGGGTACCAAAATTTAGAAATGGTTGATAGTAGTATGTTCAATACTTCTTATGCACCAAACTATTATGCAACTACTGTA GGTGCAACACTCAAAGGAACAATTATTGCGGATAAAATCAATTTCACATCTTATTGCAATAACGTTGGCGGTATTTGGGA AGCGATACTTGATGAGGGAACAATTAACGAACAGAGAAAAACTATTTCTACGTATAGCAGTACCAATAAAGTTGATAACG AGCAACTACTTTTCGATAACTTAGATTATAAAAAACATACACTGAAATTAGTATACAAAGGTCAAGACCCTAGCTATCCA GTTTCATCTCCTAGAGGTTGGTTATATTTTGGTGGCGCGCGTCCACAAGATGTTAAAGGTACAATCAACGTGTTTAAATT AGTTCCGGTTGTAACAAATGTCACGCAATCACTTTATAGCTACTCTAACAAAGACGTTGCAATGCAAATTAGAGGCGCTA ACAATTCAACTGGAGAGCAATTTGTGCCAGAACATAATGGAATAGCGACAGCTTTTAAAAACAAAGAGGCTAAGTTATTA GGAGACAATAAAGAATTACCATTTATCACTGATAGAGTTTATACAGATATCAAAAATGTTAGCTTAGTTCAGAATATTAA CGGTCGAGTTGATAGCGACGATTTAGTCAATATCATTACAAACCACTCAATTAAAAATGGTGCAATTTCGGTATATGGAA GTGTTAAGTTTTTAAAAAACACATATGTCAAAACAGCATACGCTGGCATGGTGCCGTATTTCACTAAAAACGTTAACAAA ATTAAATCGTCATTGAACAACACATATAAACCAGATATAAGCGGAACATATAGAATTGAGAAGATGCCCGAAAAACTGCA AGCTAAATCATATGTATTAAGTAATGATACTAATGATGTTATTACGGCTTTTGAATTTGAAAATATTATCAAAACAAACA GAATTAACGACAATGCGATAAAAGGCGATACATGGATAGAGCACCGCAACGCAGATATGGGCAAGATTTATAACCAACAA TTTAAAGAAGAAACAATTGAAGCGGGTTATGAATGGCAATTCAAACTGAATTACAGAACAACAGAAATACCATACGCAAA CACATTAATTTAA
Upstream 100 bases:
>100_bases GTGCCAACATCAAGCAAGTACAATCGCTAAGTTATATAAACAAATCGGCTTAAAAGGTATCTACTTCACAAGAGATAAAT ATAAATAAAGAGGTGTGTAA
Downstream 100 bases:
>100_bases AGCTAACCTTTCGAGGTTGGCTTTTTATTTTGGATAAAAGGAGCAAACAAATGGATATTAACTGGAAATTGAGATTTAAA AACAAAGCAGTATTAACAGG
Product: phage-related tail fiber
Products: NA
Alternate protein names: Phage Tail Fiber; Phage-Related Tail Fiber
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MYKIQDIETRINKKTVDIGDIGCRFYTEDENTAYVRIGINDEKGRINFKESNLTPKLHLFAEDGSIFKNEPVLIDDNVKG FLTYKIPKNVIKHVGMVRCKLFLENDHERIHVANFHFYIIDSGIDNAVQKEVSITLVEDTVKRIIRTNASELLGDDFKET LNTTAKQYIADNADKFKGERGERGEKGEAGERGAQGIAGTSADITDAIGNFSNLKDVVNLPLQPNFVEEVNKLSTTKGDM TVSIVHAPSQTFHVVQPISSSRALRVWFNKNQKDDYIIFRETEIGDYANENKSIGYQNLEMVDSSMFNTSYAPNYYATTV GATLKGTIIADKINFTSYCNNVGGIWEAILDEGTINEQRKTISTYSSTNKVDNEQLLFDNLDYKKHTLKLVYKGQDPSYP VSSPRGWLYFGGARPQDVKGTINVFKLVPVVTNVTQSLYSYSNKDVAMQIRGANNSTGEQFVPEHNGIATAFKNKEAKLL GDNKELPFITDRVYTDIKNVSLVQNINGRVDSDDLVNIITNHSIKNGAISVYGSVKFLKNTYVKTAYAGMVPYFTKNVNK IKSSLNNTYKPDISGTYRIEKMPEKLQAKSYVLSNDTNDVITAFEFENIIKTNRINDNAIKGDTWIEHRNADMGKIYNQQ FKEETIEAGYEWQFKLNYRTTEIPYANTLI
Sequences:
>Translated_670_residues MYKIQDIETRINKKTVDIGDIGCRFYTEDENTAYVRIGINDEKGRINFKESNLTPKLHLFAEDGSIFKNEPVLIDDNVKG FLTYKIPKNVIKHVGMVRCKLFLENDHERIHVANFHFYIIDSGIDNAVQKEVSITLVEDTVKRIIRTNASELLGDDFKET LNTTAKQYIADNADKFKGERGERGEKGEAGERGAQGIAGTSADITDAIGNFSNLKDVVNLPLQPNFVEEVNKLSTTKGDM TVSIVHAPSQTFHVVQPISSSRALRVWFNKNQKDDYIIFRETEIGDYANENKSIGYQNLEMVDSSMFNTSYAPNYYATTV GATLKGTIIADKINFTSYCNNVGGIWEAILDEGTINEQRKTISTYSSTNKVDNEQLLFDNLDYKKHTLKLVYKGQDPSYP VSSPRGWLYFGGARPQDVKGTINVFKLVPVVTNVTQSLYSYSNKDVAMQIRGANNSTGEQFVPEHNGIATAFKNKEAKLL GDNKELPFITDRVYTDIKNVSLVQNINGRVDSDDLVNIITNHSIKNGAISVYGSVKFLKNTYVKTAYAGMVPYFTKNVNK IKSSLNNTYKPDISGTYRIEKMPEKLQAKSYVLSNDTNDVITAFEFENIIKTNRINDNAIKGDTWIEHRNADMGKIYNQQ FKEETIEAGYEWQFKLNYRTTEIPYANTLI >Mature_670_residues MYKIQDIETRINKKTVDIGDIGCRFYTEDENTAYVRIGINDEKGRINFKESNLTPKLHLFAEDGSIFKNEPVLIDDNVKG FLTYKIPKNVIKHVGMVRCKLFLENDHERIHVANFHFYIIDSGIDNAVQKEVSITLVEDTVKRIIRTNASELLGDDFKET LNTTAKQYIADNADKFKGERGERGEKGEAGERGAQGIAGTSADITDAIGNFSNLKDVVNLPLQPNFVEEVNKLSTTKGDM TVSIVHAPSQTFHVVQPISSSRALRVWFNKNQKDDYIIFRETEIGDYANENKSIGYQNLEMVDSSMFNTSYAPNYYATTV GATLKGTIIADKINFTSYCNNVGGIWEAILDEGTINEQRKTISTYSSTNKVDNEQLLFDNLDYKKHTLKLVYKGQDPSYP VSSPRGWLYFGGARPQDVKGTINVFKLVPVVTNVTQSLYSYSNKDVAMQIRGANNSTGEQFVPEHNGIATAFKNKEAKLL GDNKELPFITDRVYTDIKNVSLVQNINGRVDSDDLVNIITNHSIKNGAISVYGSVKFLKNTYVKTAYAGMVPYFTKNVNK IKSSLNNTYKPDISGTYRIEKMPEKLQAKSYVLSNDTNDVITAFEFENIIKTNRINDNAIKGDTWIEHRNADMGKIYNQQ FKEETIEAGYEWQFKLNYRTTEIPYANTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75703; Mature: 75703
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIQDIETRINKKTVDIGDIGCRFYTEDENTAYVRIGINDEKGRINFKESNLTPKLHLF CCCCCCHHHHCCCEEEEECCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCEEEEEE AEDGSIFKNEPVLIDDNVKGFLTYKIPKNVIKHVGMVRCKLFLENDHERIHVANFHFYII ECCCCEECCCCEEEECCCCEEEEEECCHHHHHHCCEEEEEEEEECCCCEEEEEEEEEEEE DSGIDNAVQKEVSITLVEDTVKRIIRTNASELLGDDFKETLNTTAKQYIADNADKFKGER ECCCCCHHHHHEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC GERGEKGEAGERGAQGIAGTSADITDAIGNFSNLKDVVNLPLQPNFVEEVNKLSTTKGDM CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHCCHHHHCCCCCCCHHHHHHHHCCCCCCE TVSIVHAPSQTFHVVQPISSSRALRVWFNKNQKDDYIIFRETEIGDYANENKSIGYQNLE EEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH MVDSSMFNTSYAPNYYATTVGATLKGTIIADKINFTSYCNNVGGIWEAILDEGTINEQRK HHHHHHCCCCCCCCEEEEEECCEEECEEEEEECCHHHHHCCHHHHHHHHHCCCCCCHHHH TISTYSSTNKVDNEQLLFDNLDYKKHTLKLVYKGQDPSYPVSSPRGWLYFGGARPQDVKG HHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCC TINVFKLVPVVTNVTQSLYSYSNKDVAMQIRGANNSTGEQFVPEHNGIATAFKNKEAKLL CEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEE GDNKELPFITDRVYTDIKNVSLVQNINGRVDSDDLVNIITNHSIKNGAISVYGSVKFLKN CCCCCCCEEHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHH TYVKTAYAGMVPYFTKNVNKIKSSLNNTYKPDISGTYRIEKMPEKLQAKSYVLSNDTNDV HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCHHHHHHHHEEECCCCCCE ITAFEFENIIKTNRINDNAIKGDTWIEHRNADMGKIYNQQFKEETIEAGYEWQFKLNYRT EEEEEHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEE TEIPYANTLI ECCCCHHCCC >Mature Secondary Structure MYKIQDIETRINKKTVDIGDIGCRFYTEDENTAYVRIGINDEKGRINFKESNLTPKLHLF CCCCCCHHHHCCCEEEEECCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCEEEEEE AEDGSIFKNEPVLIDDNVKGFLTYKIPKNVIKHVGMVRCKLFLENDHERIHVANFHFYII ECCCCEECCCCEEEECCCCEEEEEECCHHHHHHCCEEEEEEEEECCCCEEEEEEEEEEEE DSGIDNAVQKEVSITLVEDTVKRIIRTNASELLGDDFKETLNTTAKQYIADNADKFKGER ECCCCCHHHHHEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC GERGEKGEAGERGAQGIAGTSADITDAIGNFSNLKDVVNLPLQPNFVEEVNKLSTTKGDM CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHCCHHHHCCCCCCCHHHHHHHHCCCCCCE TVSIVHAPSQTFHVVQPISSSRALRVWFNKNQKDDYIIFRETEIGDYANENKSIGYQNLE EEEEEECCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH MVDSSMFNTSYAPNYYATTVGATLKGTIIADKINFTSYCNNVGGIWEAILDEGTINEQRK HHHHHHCCCCCCCCEEEEEECCEEECEEEEEECCHHHHHCCHHHHHHHHHCCCCCCHHHH TISTYSSTNKVDNEQLLFDNLDYKKHTLKLVYKGQDPSYPVSSPRGWLYFGGARPQDVKG HHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCC TINVFKLVPVVTNVTQSLYSYSNKDVAMQIRGANNSTGEQFVPEHNGIATAFKNKEAKLL CEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEE GDNKELPFITDRVYTDIKNVSLVQNINGRVDSDDLVNIITNHSIKNGAISVYGSVKFLKN CCCCCCCEEHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEHHHHHH TYVKTAYAGMVPYFTKNVNKIKSSLNNTYKPDISGTYRIEKMPEKLQAKSYVLSNDTNDV HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHCHHHHHHHHEEECCCCCCE ITAFEFENIIKTNRINDNAIKGDTWIEHRNADMGKIYNQQFKEETIEAGYEWQFKLNYRT EEEEEHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEE TEIPYANTLI ECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA