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The map label for this gene is ytoP [H]

Identifier: 82751334

GI number: 82751334

Start: 1744104

End: 1745180

Strand: Reverse

Name: ytoP [H]

Synonym: SAB1605c

Alternate gene names: 82751334

Gene position: 1745180-1744104 (Counterclockwise)

Preceding gene: 82751336

Following gene: 82751333

Centisome position: 63.63

GC content: 33.89

Gene sequence:

>1077_bases
ATGAACATAAATAAAAAAGTAACATTACAACGAATTCAAACTTTAACTGAGCTTCATGGGGCACCAGGTTTTGAAGAAGA
AGTAAAAAATTATATGACTCAGCAAATGGCGCCGTACGTAGATGAATTTATTGAAAATCGTATGGGTGGTTTTTTTGGTG
TGAAAAAATCTAAAAATCCAAATGCAAAACGTGTAATGATTGCAGCACATATGGATGAAATTGGATTTATGATTACAAAC
ATCACTAAAAATGGAATGATTCAATTCACAAATTTAGGTGGTGTTGCAAATGATATTTGGCAAGGACAACGCTTAGTAAT
TAAAAATAGAAATGGCGATAAAATTATCGGTGTTGTTTCTAATATACCTAAACATTTTCGTACTGGTAGTGAAGGTGCAC
CGGAAATTAAAGATTTAACATTAGATATAGGTGCTCAAAATGAAGATGAAGTGCGTGAGCGTGGAATAGATATAGGAGAT
ACAATTGTACCTCACACGCCATTCACACAGTTATCTGAACATCGTTATAGTGCTAAAGCATGGGATAATCGTTATGGTTG
TGTCTTGGCAATTGAAATACTAGAATTATTAAAAGATATAGAATTAGATGTAGACTTGTATGTTGGCGCAAATGTTCAAG
AAGAGGTTGGATTACGGGGTGCGAAAGCATCTGCAGAGATGATAGACCCAGACGTTGCATTTGTAGTCGATTGTTCACCT
GCCAATGACGTTAAAGGTAATCAACCATTATCCGGTGAACTTGGTAAAGGTACGTTAATTCGCATAAAAGACGGTACAAT
GATTTTAAAGCCTGCATTTAGAGACTATTTATTAAAGTTAGTAGAAGCACATGACATTGAATATCAATACTATATGTCAC
CAGGTGGAACAGATGGTGGAGAAATTCATAAAGCTAATATTGGTATTCCGACTGCAGTTATTGGTGTATGTGCACGATAT
ATTCATAGTACAGACTCAGTATTTGATATAAGAGACTATTTTGCAGCTAGATCTTTACTTTCAGAAACCATTTGTAATTT
AGATAATAATCAAATAGAAACATTACAATATAAATAA

Upstream 100 bases:

>100_bases
TTCAGTTTAGTCATCATTTATGCTCCCTTGATTTCAAATTCATATCATTAGTTTACCATATTGAAGATGATATAATAACT
TATAAGGAGTGAGAACTTTT

Downstream 100 bases:

>100_bases
TCGGGTAATAACAATTATTATCTCTAAATAGTTATATATAATCATTAATTAAGGAGACATAAAAATGAAACAACTTGAAT
CAGAACAACAATTTGAATCT

Product: endo-1,4-beta-glucanase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFIENRMGGFFGVKKSKNPNAKRVMIAAHMDEIGFMITN
ITKNGMIQFTNLGGVANDIWQGQRLVIKNRNGDKIIGVVSNIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGD
TIVPHTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDIELDVDLYVGANVQEEVGLRGAKASAEMIDPDVAFVVDCSP
ANDVKGNQPLSGELGKGTLIRIKDGTMILKPAFRDYLLKLVEAHDIEYQYYMSPGGTDGGEIHKANIGIPTAVIGVCARY
IHSTDSVFDIRDYFAARSLLSETICNLDNNQIETLQYK

Sequences:

>Translated_358_residues
MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFIENRMGGFFGVKKSKNPNAKRVMIAAHMDEIGFMITN
ITKNGMIQFTNLGGVANDIWQGQRLVIKNRNGDKIIGVVSNIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGD
TIVPHTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDIELDVDLYVGANVQEEVGLRGAKASAEMIDPDVAFVVDCSP
ANDVKGNQPLSGELGKGTLIRIKDGTMILKPAFRDYLLKLVEAHDIEYQYYMSPGGTDGGEIHKANIGIPTAVIGVCARY
IHSTDSVFDIRDYFAARSLLSETICNLDNNQIETLQYK
>Mature_358_residues
MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFIENRMGGFFGVKKSKNPNAKRVMIAAHMDEIGFMITN
ITKNGMIQFTNLGGVANDIWQGQRLVIKNRNGDKIIGVVSNIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGD
TIVPHTPFTQLSEHRYSAKAWDNRYGCVLAIEILELLKDIELDVDLYVGANVQEEVGLRGAKASAEMIDPDVAFVVDCSP
ANDVKGNQPLSGELGKGTLIRIKDGTMILKPAFRDYLLKLVEAHDIEYQYYMSPGGTDGGEIHKANIGIPTAVIGVCARY
IHSTDSVFDIRDYFAARSLLSETICNLDNNQIETLQYK

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

Organism=Escherichia coli, GI1790332, Length=355, Percent_Identity=31.5492957746479, Blast_Score=184, Evalue=5e-48,
Organism=Escherichia coli, GI1788727, Length=350, Percent_Identity=30.8571428571429, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI87082417, Length=346, Percent_Identity=30.0578034682081, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 39812; Mature: 39812

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFIENRMGGFFGVKKSKNP
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
NAKRVMIAAHMDEIGFMITNITKNGMIQFTNLGGVANDIWQGQRLVIKNRNGDKIIGVVS
CCCEEEEEEEHHHHCEEEEEECCCCEEEEECCCCCHHHHHCCCEEEEECCCCCEEEEHHH
NIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGDTIVPHTPFTQLSEHRYSAKA
HCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
WDNRYGCVLAIEILELLKDIELDVDLYVGANVQEEVGLRGAKASAEMIDPDVAFVVDCSP
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCHHHCCCCEEEEEECCC
ANDVKGNQPLSGELGKGTLIRIKDGTMILKPAFRDYLLKLVEAHDIEYQYYMSPGGTDGG
CCCCCCCCCCCCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
EIHKANIGIPTAVIGVCARYIHSTDSVFDIRDYFAARSLLSETICNLDNNQIETLQYK
CEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MNINKKVTLQRIQTLTELHGAPGFEEEVKNYMTQQMAPYVDEFIENRMGGFFGVKKSKNP
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
NAKRVMIAAHMDEIGFMITNITKNGMIQFTNLGGVANDIWQGQRLVIKNRNGDKIIGVVS
CCCEEEEEEEHHHHCEEEEEECCCCEEEEECCCCCHHHHHCCCEEEEECCCCCEEEEHHH
NIPKHFRTGSEGAPEIKDLTLDIGAQNEDEVRERGIDIGDTIVPHTPFTQLSEHRYSAKA
HCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
WDNRYGCVLAIEILELLKDIELDVDLYVGANVQEEVGLRGAKASAEMIDPDVAFVVDCSP
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCHHHCCCCEEEEEECCC
ANDVKGNQPLSGELGKGTLIRIKDGTMILKPAFRDYLLKLVEAHDIEYQYYMSPGGTDGG
CCCCCCCCCCCCCCCCCEEEEEECCCEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
EIHKANIGIPTAVIGVCARYIHSTDSVFDIRDYFAARSLLSETICNLDNNQIETLQYK
CEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]