| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751295
Identifier: 82751295
GI number: 82751295
Start: 1695544
End: 1696233
Strand: Reverse
Name: 82751295
Synonym: SAB1566c
Alternate gene names: NA
Gene position: 1696233-1695544 (Counterclockwise)
Preceding gene: 82751297
Following gene: 82751292
Centisome position: 61.85
GC content: 33.62
Gene sequence:
>690_bases ATGAAGTTATCATTTCATGGTCAATCAACGATTTATTTAGAAGGGAACAACAAAAAGGTTATCGTAGATCCGTTTATATC AAATAACCCTAAGTGTGATTTGAATATTGAAACAGTGCAGGTAGACTATATCGTTTTAACGCACGGTCATTTTGATCACT TTGGTGATGTTGTGGAACTAGCAAAGAAAACAGGAGCAACAGTAATTGGAAGTGCAGAAATGGCTGACTATCTTTCTTCA TATCACGGTGTTGAAAATGTTCATGGTATGAATATTGGTGGTAAAGCAAACTTTGATTTCGGAAGCGTTAAATTTGTTCA AGCATTTCATAGTTCAAGTTTTACACATGAAAATGGTATTCCAGTTTATTTAGGTATGCCAATTGGTATCGTGTTTGAAG TTGAAGGAAAAACAATTTATCATACTGGTGATACAGGTCTGTTTAGTGACATGTCACTTATTGCGAAACGTCATCCAGTT GATGTATGTTTTGTACCAATTGGAGATAATTTTACGATGGGTATTGATGATGCAAGTTATGCTATTAATGAATTTATTAA ACCAAAAATTTCTGTACCGATTCATTATGATACATTCCCATTAATCGAACAAGATCCACAACAATTTAAAGATGCTGTTA ATGTAGGGGACGTGCAAATTTTAAAACCAGGTGAATCTGTTCAGTTTTAA
Upstream 100 bases:
>100_bases ACATTAACTAGATTTTCAATTTTTAAAATTTGAGAATTTGTTATAACTAAGTGGCAAAAGGGTACTAAATTTATATAGCA ATTGATAGGAGGATGCTCAA
Downstream 100 bases:
>100_bases ATAGAATATAGATTTTACACTAAAAAACACCTCGCTAATCTATGTGGAAGTTATCGTCCGCATATTTTTAGTGAGTGTTT TTATATTCTACTGATATTGT
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVELAKKTGATVIGSAEMADYLSS YHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGIPVYLGMPIGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPV DVCFVPIGDNFTMGIDDASYAINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF
Sequences:
>Translated_229_residues MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVELAKKTGATVIGSAEMADYLSS YHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGIPVYLGMPIGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPV DVCFVPIGDNFTMGIDDASYAINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF >Mature_229_residues MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVELAKKTGATVIGSAEMADYLSS YHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGIPVYLGMPIGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPV DVCFVPIGDNFTMGIDDASYAINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 25233; Mature: 25233
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVEL CEEEECCCEEEEEECCCCEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCHHHHHHHHH AKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGI HHHCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC PVYLGMPIGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPVDVCFVPIGDNFTMGIDDASY EEEEECCEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCEEECCCCHHH AINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCC >Mature Secondary Structure MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVEL CEEEECCCEEEEEECCCCEEEECCCCCCCCEEEEEEEEEEEEEEEEECCCCHHHHHHHHH AKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGI HHHCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC PVYLGMPIGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPVDVCFVPIGDNFTMGIDDASY EEEEECCEEEEEEECCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCEEECCCCHHH AINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]