| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is aroE
Identifier: 82751198
GI number: 82751198
Start: 1583489
End: 1584295
Strand: Reverse
Name: aroE
Synonym: SAB1468c
Alternate gene names: 82751198
Gene position: 1584295-1583489 (Counterclockwise)
Preceding gene: 82751199
Following gene: 82751197
Centisome position: 57.77
GC content: 31.1
Gene sequence:
>807_bases ATGAAATTTGCAGTTATCGGAAATCCTATTTCACATTCCTTGTCGCCCGTTATGCATAGAGCAAATTTTAATTCTTTAGG ATTAGATGATACTTATGAAGCTTTAAATATTCCAATTGAAGATTTTCATTTAATTAAAGAAATTATTTCAAAAAAAGAAT TAGATGGCTTTAATATCACAATTCCTCATAAAGAACGTATCATACCGTATTTAGATTATGTTGATGAACAAGCGATTAAT GCAGGTGCAGTTAACACTGTTTTGATAAAAGATGGCAAGTGGATAGGGTATAATACAGATGGTATCGGTTATGTTAAAGG ATTGCACAGCGTTTATCCAGATTTAGAAAATGCATACATTTTAATTTTGGGCGCAGGTGGTGCAAGTAAAGGTATTGCTT ATGAATTAGCAAAATTTTTAAAGCTCAAATTAACTGTTGCGAATAGAACGATGGCTCGTTTTGAATCTTGGAATTTAAAT ATTAACCAAATTTCATTGGCAGATGCTGAAAATTATTTAGCTGAATTCGATATTGTTATTAATACAACACCAGCGGGTAT GGCTGGAAATAACGAAAGTATTATTAATTTAAAGCATCTTTCTCCCAATACTTTAATGAGTGACATTATTTATATACCGT ATAAAACACCTATTTTAGAGGAAGCAGAGCGCAAGGGAAACCATATTTATAATGGCTTAGATATGTTTGTTTACCAGGGT GCGGAAAGCTTTAAAATTTGGACTAATAAAGATGCTGATATTAATTCTATGAAAACAGCAGTTTTACAACAATTAAAAGG AGAATAA
Upstream 100 bases:
>100_bases GGCTTTATAACTATAGGACCAGGAGCTAAAGTAATCGTTCGTGTTCCTAAAAATGTTGATGTTGTATTAAGAAATTCTAT TTTATAAGGTGATTTAAAAA
Downstream 100 bases:
>100_bases CATATGCTTACTGGCAAACAAAAAAGATACTTAAGAAGTTTAGCACACAATATTGATCCGATTTTTCAAATTGGAAAAGG CGGTATCAACGAAAACATGA
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAIN AGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFLKLKLTVANRTMARFESWNLN INQISLADAENYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIIYIPYKTPILEEAERKGNHIYNGLDMFVYQG AESFKIWTNKDADINSMKTAVLQQLKGE
Sequences:
>Translated_268_residues MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAIN AGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFLKLKLTVANRTMARFESWNLN INQISLADAENYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIIYIPYKTPILEEAERKGNHIYNGLDMFVYQG AESFKIWTNKDADINSMKTAVLQQLKGE >Mature_268_residues MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAIN AGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFLKLKLTVANRTMARFESWNLN INQISLADAENYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIIYIPYKTPILEEAERKGNHIYNGLDMFVYQG AESFKIWTNKDADINSMKTAVLQQLKGE
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1789675, Length=274, Percent_Identity=33.5766423357664, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1787983, Length=276, Percent_Identity=31.5217391304348, Blast_Score=135, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6320332, Length=280, Percent_Identity=28.2142857142857, Blast_Score=93, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 29896; Mature: 29896
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNIT CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEE IPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYI ECCHHCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCEE LILGAGGASKGIAYELAKFLKLKLTVANRTMARFESWNLNINQISLADAENYLAEFDIVI EEEECCCCCCCHHHHHHHHHEEEEEEHHHHHHHHHHCCCCEEEEEECCHHCCCEEEEEEE NTTPAGMAGNNESIINLKHLSPNTLMSDIIYIPYKTPILEEAERKGNHIYNGLDMFVYQG ECCCCCCCCCCCCEEEEEECCCHHHHHCEEEECCCCCHHHHHHHCCCEECCCCEEEEECC AESFKIWTNKDADINSMKTAVLQQLKGE CCCEEEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNIT CEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEE IPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYI ECCHHCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCEE LILGAGGASKGIAYELAKFLKLKLTVANRTMARFESWNLNINQISLADAENYLAEFDIVI EEEECCCCCCCHHHHHHHHHEEEEEEHHHHHHHHHHCCCCEEEEEECCHHCCCEEEEEEE NTTPAGMAGNNESIINLKHLSPNTLMSDIIYIPYKTPILEEAERKGNHIYNGLDMFVYQG ECCCCCCCCCCCCEEEEEECCCHHHHHCEEEECCCCCHHHHHHHCCCEECCCCEEEEECC AESFKIWTNKDADINSMKTAVLQQLKGE CCCEEEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA