| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is cshB [H]
Identifier: 82751161
GI number: 82751161
Start: 1547189
End: 1548535
Strand: Reverse
Name: cshB [H]
Synonym: SAB1430c
Alternate gene names: 82751161
Gene position: 1548535-1547189 (Counterclockwise)
Preceding gene: 82751162
Following gene: 82751160
Centisome position: 56.46
GC content: 32.59
Gene sequence:
>1347_bases ATGGCAAAACATCCATTCGAACAATTTAATCTAGAATCTAGTTTAATTGACGCTGTGAAAGACCTTAATTTTGAAAAACC AACTGAAATTCAGAATCGAATTATTCCAAGAATACTAAAGAAAACAAATTTAATTGGTCAATCTCAAACGGGTACAGGGA AATCTCATGCATTTTTATTACCATTAATGCAGTTAATTGATAGTGAAATAAAAGAACCACAAGCAATCGTAGTTGCACCA ACAAGAGAACTTGCACAACAACTATATGATGCAGCGAACCATTTAAGCCAATTTAAAGCTGGTGTTTCAGTTAAAGTTTT TATTGGTGGTACAGATATAGAGAAAGATAGACAACGTTGTAATGCACAACCTCAATTGATTATAGGTACCCCTACTAGAA TTAATGATTTAGCTAAAACGGGACATTTACATGTGCACTTAGCATCATATTTAGTTATTGATGAAGCGGACCTTATGATT GACTTAGGATTAATTGAAGATGTAGATTACATCGCTGCAAGATTGGAAGATAATGCAAATATTGCGGTGTTTAGTGCTAC AATTCCACAACAGTTACAACCATTTTTAAATAAATATTTAAGTCATCCAGAATATGTAGCTGTCGACAGTAAAAAACAAA ATAAAAAGAACATCGAATTCTTTTTAATACCTACTAAAGGTGCAGCTAAAGTTGAAAAGACTTTAAATTTAATTGATATA CTAAATCCATACTTATGTATTGTTTTCTGTAATAGTAGAGATAACGCAAATGATTTAGCACGTTCACTAAATGAAGCTGG TATTAAAGTTGGTATGATTCATGGTGGTTTAACGCCACGTGAACGTAAACAACAAATGAAACGTATACGTAATTTAGAAG TCCAATACGTTATAGCCAGCGATTTAGCATCTCGTGGTATTGATATTGAAGGTGTTAGTCATGTCATCAATTTTGATGTG CCAAATGATATTGACTTCTTTACACATAGAGTCGGCCGAACTGGCCGTGGGAATTATAAAGGTGTAGCAATTACGCTTTA TAGTCCTGATGAAGAACACAATATTTCATTAATAGAAGATCGCGGTTTTGTTTTCAATACTGTTGATATTAAAGATGGTG AGTTAAAAGAAGTTAAAGCGCACAATCAGCGTCAAGCAAGAATGCGCAAAGATGACCATTTAACTAATCAAGTGAAGAAC AAAGTTCGAAGTAAAATTAAAAACAAAGTTAAACCAGGTTATAAGAAGAAATTTAAACAAGAAGTTGAAAAAATGAAACG TCAAGAGCGTAAACAATTTAGTAAGCAGCAAAATAGACAAAAACGTAAGCAAAACAAAAAAGGTTAG
Upstream 100 bases:
>100_bases GATTTCTAAATTTTGAAATTTCGAGGTTTTAATATTTTTATTTAAAATAGCACATTTATACTTTATAATGGTAAAGATGA ACATATAAGGAGGCCAAATC
Downstream 100 bases:
>100_bases GTGTGTTTTATGTTATTAGGATCACATGTTTCAATGAGTGGTAAAAAGATGTTAGAAGGTTCTGCTATAGAAGCGCATGA ATATGGTGAAACAACATTCA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKKTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAP TRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMI DLGLIEDVDYIAARLEDNANIAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDI LNPYLCIVFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEVQYVIASDLASRGIDIEGVSHVINFDV PNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIEDRGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKN KVRSKIKNKVKPGYKKKFKQEVEKMKRQERKQFSKQQNRQKRKQNKKG
Sequences:
>Translated_448_residues MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKKTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAP TRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMI DLGLIEDVDYIAARLEDNANIAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDI LNPYLCIVFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEVQYVIASDLASRGIDIEGVSHVINFDV PNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIEDRGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKN KVRSKIKNKVKPGYKKKFKQEVEKMKRQERKQFSKQQNRQKRKQNKKG >Mature_447_residues AKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKKTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPT RELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMID LGLIEDVDYIAARLEDNANIAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDIL NPYLCIVFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEVQYVIASDLASRGIDIEGVSHVINFDVP NDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIEDRGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKNK VRSKIKNKVKPGYKKKFKQEVEKMKRQERKQFSKQQNRQKRKQNKKG
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=347, Percent_Identity=31.9884726224784, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI164664518, Length=356, Percent_Identity=32.3033707865169, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=31.9088319088319, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=31.9088319088319, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI4758112, Length=371, Percent_Identity=30.188679245283, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI18375623, Length=371, Percent_Identity=30.188679245283, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=31.1614730878187, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI4503529, Length=356, Percent_Identity=31.7415730337079, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI301171467, Length=363, Percent_Identity=31.9559228650138, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI87196351, Length=363, Percent_Identity=31.9559228650138, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI301171475, Length=363, Percent_Identity=31.9559228650138, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI83700235, Length=356, Percent_Identity=31.4606741573034, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI262118318, Length=369, Percent_Identity=31.9783197831978, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI169881239, Length=381, Percent_Identity=30.1837270341207, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI13514809, Length=381, Percent_Identity=30.1837270341207, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI216548263, Length=369, Percent_Identity=31.9783197831978, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI262231852, Length=369, Percent_Identity=31.9783197831978, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI13518015, Length=369, Percent_Identity=31.9783197831978, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=30.46875, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=31.2849162011173, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI222352149, Length=353, Percent_Identity=32.2946175637394, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI20149629, Length=404, Percent_Identity=31.9306930693069, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=30.3977272727273, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=30.3977272727273, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI148613856, Length=366, Percent_Identity=29.7814207650273, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI38201710, Length=366, Percent_Identity=29.7814207650273, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI8922886, Length=364, Percent_Identity=28.2967032967033, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI6005743, Length=364, Percent_Identity=28.5714285714286, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI256223453, Length=363, Percent_Identity=29.7520661157025, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI4758138, Length=372, Percent_Identity=28.7634408602151, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI50659095, Length=384, Percent_Identity=29.4270833333333, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI41327773, Length=355, Percent_Identity=30.1408450704225, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI21071032, Length=354, Percent_Identity=27.1186440677966, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI62241022, Length=348, Percent_Identity=28.448275862069, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=29.1989664082687, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI188035877, Length=345, Percent_Identity=28.695652173913, Blast_Score=158, Evalue=8e-39, Organism=Homo sapiens, GI164419732, Length=354, Percent_Identity=29.3785310734463, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI31542656, Length=364, Percent_Identity=27.7472527472527, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI55749865, Length=361, Percent_Identity=29.6398891966759, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI62241024, Length=325, Percent_Identity=28.6153846153846, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI41327779, Length=369, Percent_Identity=27.10027100271, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI38569505, Length=360, Percent_Identity=29.1666666666667, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI38569503, Length=360, Percent_Identity=29.1666666666667, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=27.7929155313352, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI256773275, Length=393, Percent_Identity=28.2442748091603, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI38327634, Length=351, Percent_Identity=29.0598290598291, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI41327776, Length=401, Percent_Identity=28.927680798005, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI9506931, Length=471, Percent_Identity=25.0530785562633, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI17505907, Length=427, Percent_Identity=23.4192037470726, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI154759257, Length=474, Percent_Identity=24.0506329113924, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=26.8518518518519, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI20336298, Length=224, Percent_Identity=29.0178571428571, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI4826686, Length=176, Percent_Identity=30.1136363636364, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI87082221, Length=339, Percent_Identity=34.2182890855457, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1787605, Length=357, Percent_Identity=30.2521008403361, Blast_Score=192, Evalue=5e-50, Organism=Escherichia coli, GI1787016, Length=360, Percent_Identity=30.2777777777778, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1790214, Length=363, Percent_Identity=29.4765840220386, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=32.2388059701493, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI48994977, Length=103, Percent_Identity=31.0679611650485, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71995724, Length=347, Percent_Identity=32.5648414985591, Blast_Score=217, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17507121, Length=347, Percent_Identity=32.2766570605187, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71987143, Length=355, Percent_Identity=30.4225352112676, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17537549, Length=371, Percent_Identity=32.3450134770889, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI71982858, Length=360, Percent_Identity=31.6666666666667, Blast_Score=197, Evalue=9e-51, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=29.6103896103896, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=32.1525885558583, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=32.1525885558583, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=32.1525885558583, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI86570094, Length=382, Percent_Identity=30.6282722513089, Blast_Score=182, Evalue=5e-46, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=30, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI17552114, Length=354, Percent_Identity=31.3559322033898, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507945, Length=346, Percent_Identity=30.3468208092486, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI71995718, Length=374, Percent_Identity=29.4117647058824, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=28.080229226361, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=28.080229226361, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=31.3672922252011, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17555296, Length=357, Percent_Identity=29.4117647058824, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=27.5862068965517, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=31.283422459893, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI115533224, Length=356, Percent_Identity=28.9325842696629, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=30.6451612903226, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17536099, Length=400, Percent_Identity=28.25, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI17510559, Length=385, Percent_Identity=27.012987012987, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17536101, Length=400, Percent_Identity=28.25, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17509811, Length=359, Percent_Identity=27.2980501392758, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17507641, Length=391, Percent_Identity=25.5754475703325, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17536103, Length=378, Percent_Identity=29.3650793650794, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=25.8064516129032, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=25.679012345679, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI115532548, Length=370, Percent_Identity=24.3243243243243, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI115532546, Length=370, Percent_Identity=24.3243243243243, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17508543, Length=370, Percent_Identity=27.2972972972973, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=27.2251308900524, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI71990816, Length=384, Percent_Identity=26.3020833333333, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=31.3725490196078, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17553716, Length=351, Percent_Identity=24.7863247863248, Blast_Score=124, Evalue=9e-29, Organism=Caenorhabditis elegans, GI17505370, Length=352, Percent_Identity=26.9886363636364, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17556951, Length=358, Percent_Identity=24.0223463687151, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI25148291, Length=106, Percent_Identity=29.2452830188679, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=35.0515463917526, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320224, Length=358, Percent_Identity=31.2849162011173, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=31.4606741573034, Blast_Score=192, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=30.7042253521127, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=30.5177111716621, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320041, Length=354, Percent_Identity=30.5084745762712, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=29.7082228116711, Blast_Score=181, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321856, Length=358, Percent_Identity=31.5642458100559, Blast_Score=176, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=29.0960451977401, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321360, Length=364, Percent_Identity=30.4945054945055, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6324620, Length=360, Percent_Identity=31.1111111111111, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6320173, Length=411, Percent_Identity=26.7639902676399, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6322912, Length=327, Percent_Identity=30.2752293577982, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6322323, Length=327, Percent_Identity=30.2752293577982, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6321963, Length=413, Percent_Identity=28.5714285714286, Blast_Score=162, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6320449, Length=366, Percent_Identity=28.4153005464481, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=413, Percent_Identity=26.8765133171913, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=27.3972602739726, Blast_Score=143, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=25.1989389920424, Blast_Score=143, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6321111, Length=381, Percent_Identity=28.0839895013123, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6323947, Length=424, Percent_Identity=26.8867924528302, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6321267, Length=361, Percent_Identity=31.0249307479224, Blast_Score=133, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6320400, Length=386, Percent_Identity=27.720207253886, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323306, Length=416, Percent_Identity=26.2019230769231, Blast_Score=126, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=26.271186440678, Blast_Score=87, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6322876, Length=186, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI24645031, Length=347, Percent_Identity=32.2766570605187, Blast_Score=208, Evalue=6e-54, Organism=Drosophila melanogaster, GI24584399, Length=360, Percent_Identity=31.1111111111111, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24584994, Length=385, Percent_Identity=30.1298701298701, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=34.2696629213483, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=31.8435754189944, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24581954, Length=361, Percent_Identity=31.5789473684211, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581952, Length=361, Percent_Identity=31.5789473684211, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI24581956, Length=361, Percent_Identity=31.5789473684211, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355075, Length=366, Percent_Identity=32.5136612021858, Blast_Score=179, Evalue=5e-45, Organism=Drosophila melanogaster, GI24583281, Length=358, Percent_Identity=31.5642458100559, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI18857967, Length=383, Percent_Identity=30.2872062663185, Blast_Score=178, Evalue=8e-45, Organism=Drosophila melanogaster, GI24583279, Length=358, Percent_Identity=31.5642458100559, Blast_Score=178, Evalue=8e-45, Organism=Drosophila melanogaster, GI24582080, Length=355, Percent_Identity=30.9859154929577, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24582078, Length=355, Percent_Identity=30.9859154929577, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI17136248, Length=355, Percent_Identity=30.9859154929577, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24582075, Length=355, Percent_Identity=30.9859154929577, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI17985987, Length=384, Percent_Identity=29.1666666666667, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=29.041095890411, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI21356161, Length=354, Percent_Identity=32.2033898305085, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24644479, Length=357, Percent_Identity=28.2913165266106, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI24644483, Length=357, Percent_Identity=28.2913165266106, Blast_Score=171, Evalue=7e-43, Organism=Drosophila melanogaster, GI281361218, Length=357, Percent_Identity=28.2913165266106, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24644481, Length=357, Percent_Identity=28.2913165266106, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24644487, Length=357, Percent_Identity=28.2913165266106, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI45551833, Length=357, Percent_Identity=28.2913165266106, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24644485, Length=357, Percent_Identity=28.2913165266106, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=31.1111111111111, Blast_Score=168, Evalue=6e-42, Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=29.2134831460674, Blast_Score=167, Evalue=9e-42, Organism=Drosophila melanogaster, GI28575014, Length=356, Percent_Identity=28.3707865168539, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI24662330, Length=348, Percent_Identity=27.8735632183908, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI17136814, Length=464, Percent_Identity=27.1551724137931, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24666101, Length=427, Percent_Identity=27.8688524590164, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=27.2965879265092, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI18859659, Length=445, Percent_Identity=25.6179775280899, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI28571338, Length=445, Percent_Identity=25.6179775280899, Blast_Score=131, Evalue=8e-31, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=26.984126984127, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI28571808, Length=356, Percent_Identity=27.247191011236, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI28571809, Length=356, Percent_Identity=27.247191011236, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI20130173, Length=445, Percent_Identity=25.1685393258427, Blast_Score=125, Evalue=9e-29, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=26.6666666666667, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI24668515, Length=446, Percent_Identity=23.7668161434978, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24642822, Length=391, Percent_Identity=26.3427109974425, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI19920478, Length=351, Percent_Identity=25.0712250712251, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17136666, Length=423, Percent_Identity=24.5862884160757, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI24640164, Length=352, Percent_Identity=22.7272727272727, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24646066, Length=317, Percent_Identity=21.7665615141956, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50975; Mature: 50844
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKKTNLIGQSQTGTGKSHAFLL CCCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH PLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRC HHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHC NAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNAN CCCCEEEEECCCHHHHHHHCCCEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHCCCCC IAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDI EEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH LNPYLCIVFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEVQYVIAS CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEHH DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIED HHHHCCCCCCCCHHEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEC RGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKNKVRSKIKNKVKPGYKKKFKQ CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EVEKMKRQERKQFSKQQNRQKRKQNKKG HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKKTNLIGQSQTGTGKSHAFLL CCCCCHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH PLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKVFIGGTDIEKDRQRC HHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHC NAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNAN CCCCEEEEECCCHHHHHHHCCCEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHCCCCC IAVFSATIPQQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDI EEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH LNPYLCIVFCNSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEVQYVIAS CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEHH DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIED HHHHCCCCCCCCHHEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEC RGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKNKVRSKIKNKVKPGYKKKFKQ CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EVEKMKRQERKQFSKQQNRQKRKQNKKG HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]