| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is yojO [H]
Identifier: 82751000
GI number: 82751000
Start: 1378529
End: 1380415
Strand: Reverse
Name: yojO [H]
Synonym: SAB1264c
Alternate gene names: 82751000
Gene position: 1380415-1378529 (Counterclockwise)
Preceding gene: 82751001
Following gene: 82750999
Centisome position: 50.33
GC content: 31.64
Gene sequence:
>1887_bases ATGAGTGATCGTTTCATAAAATTTAACGACGAACAGTTAGATACCAAGCAAGTAATGATGTTGCAAGACTTAGCTCGACT CTTATTAAAAAATGAACAAACACAAGTTAAAATCCAAAAATTCCCTTACTATAATCCTGTTCAAAATGTTTTGATTACGA GTTGGTTTTGGTCACATCGACCAAGCCATATCGAAATGGCTGGTTTAAAAACAGATGTTATGTTAGCTGCTTACGGTTAT CATATGATGGATGTACAAATTGTAAATGAAGTAGTACAAGATAAAACTTTTAAACACCCTAAATTTTATCAACAACTTTT TAAATTATTAGAAGATATGCGCGTATTAAATTCTATTAATGTTGAGCGCCCAAGTACTGCTAAATTAATTGATCTTCGCT TAGATACACGGATATCATATACGGAATCTCAAATTAAAGTGTATCGTACTAAAACACAATATACAGATTTATTATTTTTA TATTTAGAACATGCATTTTTAAGTCAAGATTTCTTTGATATACCATCTATACATTCAGATTTAGATGATATTTTAGTTAA TATGTTCTTATATTTACCTAATTTTTTCCAAAATCAAAATTCTGAAGATAATATGTATCTGGCTCAAAGAATTATGTATC AAGTAGATGATATTTTAAAAGAAGATATGCTAAACGAATATTATTACTTACCTAAAACACTATATAATACATTAGCTAGT CCAGAGTTTGAAGATTTAAAGAGAACTGATGCAAGTCAAGTCGATGGGCAAGATGATACTTCAGAAGATGATGATAACCA AAGTGAAAAAGCTGACTCTAAATCTGCAGATAGTGAGTCAAAAGGTGGCGCTTATTTAGAAATGGAGCTTCACGAAGGAC AAAATAGTGAAACATTGGGTAATGATGAAGCACGTGAAGGCGATGCTACAGACGATATGACAGATATGATGACCAAAAAG GGCAAAGGATCAAACGATACGCTAAATCGTGAAGAAGGCGATGCTGTTGGTCAAAGCCAAGCATTTCAACTTGATGGTGT GAACAAAAATGTAGAAATAAAATGTCAAATTCCTGAAATTGAGCCACAATATGTTTTAGAATATCAAGAATCGAAACAAG ACGTACAATATGAAATCAAAGACTTAATTCAAATTATAAAGAAAACGATTGAACGAGAACAACGAGATGCACGTTTTAAT TTAACAAAAGGGCGATTACAAAAGGATTTAATTAATTGGTTTATCGACGATCAATATAAATTGTTTTACAAAAAACAAGA TTTAAGTAAATCATTTGATGCGACGTTTACATTGTTAATTGATGCGTCAGCAAGTATGCATGATAAAATGGCTGAAACGA AGAAAGGTGTAGTGTTATTCCACGAGACGTTAAAAGCATTGAACATTAAACATGAAATTTTATCATTCAGTGAGGATGCC TTTGATTCAGACGAGCATGCACAACCAAATATCATTAATGAGATTATTAACTATGATTACTCAACCTTTGAAAAAGATGG CCCACGTATTATAGCACTTGAACCTCAAGATGATAATCGTGATGGTGTTGCTATTAGAGTTGCGAGTGAACGATTAATGC GTCGAAATCAACATCAACGATTTTTAATCGTATTTTCTGACGGCGAACCGTCTGCATTTAATTATAGTCAAGATGGTATT ATTGATACGTATGAAGCTGTAGAAATGTCACGTAAATTTGGCATTGAAGTATTTAATGTATTTTTGAGTCAAGATCCAAT AACTGAAGATGTTGAACAAACAATTCATAATATTTATGGTCAATATGCTATTTTCGTTGAAGGTGTTGCGCATTTACCTG GATATCTCTCTCCATTATTAAAAAAATTACTACTTAAATCTTTATAA
Upstream 100 bases:
>100_bases CGTGCAATTAAACGTACAATTATTGATAAATTGGAAGATGAACGTGAACAACAAGCAATATATAATGCCGTAGAACTAAA CTTTTAAAGAGGGATAAAAC
Downstream 100 bases:
>100_bases ATAAGTTTAAAATATGAGTTTATATGAAATTGTGAATAAAAGTCATCAGTTACTATTTAAAAAGTAAATTTGAAGAATTT TATTTTCTGTCATAATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MSDRFIKFNDEQLDTKQVMMLQDLARLLLKNEQTQVKIQKFPYYNPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGY HMMDVQIVNEVVQDKTFKHPKFYQQLFKLLEDMRVLNSINVERPSTAKLIDLRLDTRISYTESQIKVYRTKTQYTDLLFL YLEHAFLSQDFFDIPSIHSDLDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDILKEDMLNEYYYLPKTLYNTLAS PEFEDLKRTDASQVDGQDDTSEDDDNQSEKADSKSADSESKGGAYLEMELHEGQNSETLGNDEAREGDATDDMTDMMTKK GKGSNDTLNREEGDAVGQSQAFQLDGVNKNVEIKCQIPEIEPQYVLEYQESKQDVQYEIKDLIQIIKKTIEREQRDARFN LTKGRLQKDLINWFIDDQYKLFYKKQDLSKSFDATFTLLIDASASMHDKMAETKKGVVLFHETLKALNIKHEILSFSEDA FDSDEHAQPNIINEIINYDYSTFEKDGPRIIALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYSQDGI IDTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYGQYAIFVEGVAHLPGYLSPLLKKLLLKSL
Sequences:
>Translated_628_residues MSDRFIKFNDEQLDTKQVMMLQDLARLLLKNEQTQVKIQKFPYYNPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGY HMMDVQIVNEVVQDKTFKHPKFYQQLFKLLEDMRVLNSINVERPSTAKLIDLRLDTRISYTESQIKVYRTKTQYTDLLFL YLEHAFLSQDFFDIPSIHSDLDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDILKEDMLNEYYYLPKTLYNTLAS PEFEDLKRTDASQVDGQDDTSEDDDNQSEKADSKSADSESKGGAYLEMELHEGQNSETLGNDEAREGDATDDMTDMMTKK GKGSNDTLNREEGDAVGQSQAFQLDGVNKNVEIKCQIPEIEPQYVLEYQESKQDVQYEIKDLIQIIKKTIEREQRDARFN LTKGRLQKDLINWFIDDQYKLFYKKQDLSKSFDATFTLLIDASASMHDKMAETKKGVVLFHETLKALNIKHEILSFSEDA FDSDEHAQPNIINEIINYDYSTFEKDGPRIIALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYSQDGI IDTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYGQYAIFVEGVAHLPGYLSPLLKKLLLKSL >Mature_627_residues SDRFIKFNDEQLDTKQVMMLQDLARLLLKNEQTQVKIQKFPYYNPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGYH MMDVQIVNEVVQDKTFKHPKFYQQLFKLLEDMRVLNSINVERPSTAKLIDLRLDTRISYTESQIKVYRTKTQYTDLLFLY LEHAFLSQDFFDIPSIHSDLDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDILKEDMLNEYYYLPKTLYNTLASP EFEDLKRTDASQVDGQDDTSEDDDNQSEKADSKSADSESKGGAYLEMELHEGQNSETLGNDEAREGDATDDMTDMMTKKG KGSNDTLNREEGDAVGQSQAFQLDGVNKNVEIKCQIPEIEPQYVLEYQESKQDVQYEIKDLIQIIKKTIEREQRDARFNL TKGRLQKDLINWFIDDQYKLFYKKQDLSKSFDATFTLLIDASASMHDKMAETKKGVVLFHETLKALNIKHEILSFSEDAF DSDEHAQPNIINEIINYDYSTFEKDGPRIIALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYSQDGII DTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYGQYAIFVEGVAHLPGYLSPLLKKLLLKSL
Specific function: Unknown
COG id: COG4548
COG function: function code P; Nitric oxide reductase activation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73055; Mature: 72924
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRFIKFNDEQLDTKQVMMLQDLARLLLKNEQTQVKIQKFPYYNPVQNVLITSWFWSHR CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC PSHIEMAGLKTDVMLAAYGYHMMDVQIVNEVVQDKTFKHPKFYQQLFKLLEDMRVLNSIN CCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC VERPSTAKLIDLRLDTRISYTESQIKVYRTKTQYTDLLFLYLEHAFLSQDFFDIPSIHSD CCCCCCCEEEEEEECCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC LDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDILKEDMLNEYYYLPKTLYNTLAS HHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEFEDLKRTDASQVDGQDDTSEDDDNQSEKADSKSADSESKGGAYLEMELHEGQNSETLG CCHHHHHHCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCC NDEAREGDATDDMTDMMTKKGKGSNDTLNREEGDAVGQSQAFQLDGVNKNVEIKCQIPEI CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCC EPQYVLEYQESKQDVQYEIKDLIQIIKKTIEREQRDARFNLTKGRLQKDLINWFIDDQYK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH LFYKKQDLSKSFDATFTLLIDASASMHDKMAETKKGVVLFHETLKALNIKHEILSFSEDA EEEEHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCC FDSDEHAQPNIINEIINYDYSTFEKDGPRIIALEPQDDNRDGVAIRVASERLMRRNQHQR CCCCCCCCCHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCE FLIVFSDGEPSAFNYSQDGIIDTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYG EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHC QYAIFVEGVAHLPGYLSPLLKKLLLKSL CHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDRFIKFNDEQLDTKQVMMLQDLARLLLKNEQTQVKIQKFPYYNPVQNVLITSWFWSHR CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC PSHIEMAGLKTDVMLAAYGYHMMDVQIVNEVVQDKTFKHPKFYQQLFKLLEDMRVLNSIN CCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC VERPSTAKLIDLRLDTRISYTESQIKVYRTKTQYTDLLFLYLEHAFLSQDFFDIPSIHSD CCCCCCCEEEEEEECCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC LDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDILKEDMLNEYYYLPKTLYNTLAS HHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEFEDLKRTDASQVDGQDDTSEDDDNQSEKADSKSADSESKGGAYLEMELHEGQNSETLG CCHHHHHHCCHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCC NDEAREGDATDDMTDMMTKKGKGSNDTLNREEGDAVGQSQAFQLDGVNKNVEIKCQIPEI CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCC EPQYVLEYQESKQDVQYEIKDLIQIIKKTIEREQRDARFNLTKGRLQKDLINWFIDDQYK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH LFYKKQDLSKSFDATFTLLIDASASMHDKMAETKKGVVLFHETLKALNIKHEILSFSEDA EEEEHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCC FDSDEHAQPNIINEIINYDYSTFEKDGPRIIALEPQDDNRDGVAIRVASERLMRRNQHQR CCCCCCCCCHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCE FLIVFSDGEPSAFNYSQDGIIDTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYG EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHC QYAIFVEGVAHLPGYLSPLLKKLLLKSL CHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]