| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is tyrA [H]
Identifier: 82750956
GI number: 82750956
Start: 1335421
End: 1336512
Strand: Reverse
Name: tyrA [H]
Synonym: SAB1220c
Alternate gene names: 82750956
Gene position: 1336512-1335421 (Counterclockwise)
Preceding gene: 82750969
Following gene: 82750953
Centisome position: 48.73
GC content: 33.15
Gene sequence:
>1092_bases ATGACAACAGTTTTATTTGTTGGGCTTGGGTTAATTGGTGGAAGTCTTGCTAGCAATATAAAATACCATAACCCTAATAC TAATATTATTGCATACGATGCAGATACTTCTCAGTTAGATAAAGCTAAATCAATCGGTATTATTAATGAAAAATGTTTAA ATTATAGTGAAGCTATTAAAAAAGCCGATGTAATTATTTATGCAACACCTGTTGCTATCACAAATAAATATCTTAGCGAG CTTATAGATATGCCAACTAAACCTGGTGTTATTGTTTCTGATACTGGTAGTACTAAAGCAATGATACAGCAACACGAATG CAGTTTATTAAAGCATAATATTCATTTAGTCAGTGGTCATCCAATGGCTGGTAGTCATAAATCCGGTGTACTAAATGCTA AAAAGCACTTATTTGAAAACGCTTATTATATTTTAGTCTACAATGAGCCAAGAAATGAGCAAGCAGCAAACACGTTAAAA GAACTGTTATCACCTACTCTTGCTAAATTTATTGTAACTACTGCTGAAGAACACGACTACGTAACAAGCGTCGTAAGTCA TTTACCTCATATCGTTGCATCTAGTTTAGTTCATGTTAGTCAAAAGAACGGTCAAGAACATCATTTAGTCAATAAACTTG CAGCTGGTGGTTTTCGTGATATCACTCGTATAGCTAGTAGTAATGTACAAATGTGGAAAGATATCACCTTGAGTAATAAA ACGTATATTTTAGAAATGATTGGACAACTAAAAAGTCAGTTTCAAGATTTAGAAAAACTAATAGAAAGCAATGATTCTGA AAAATTGTCATCATTTTTTGCCGAAGCTAAATCGTATCGTGACGCACTGCCCGCTAAACAACTAGGTGGATTAAATACTG CGTATGATCTATATGTAGATATTCCGGATGAATCAGGTATGATAAGTAAAGTGACTTATATTCTGAGTTTACATAACATA TCTATAAGCAACTTAAGGATCTTAGAAGTACGCGAAGATATATACGGTGCTTTAAAAATTAGTTTCAAAAATCCTACTGA CCGAGAACGCGGTATGCAAGCATTGAGTGATTTTGATTGTTATATCCAATAA
Upstream 100 bases:
>100_bases ATCTATTAATGCTATTATCGATTTTTATTTGCTATTGCACTGTGTCAACAGCTCATTTACAATGTTATTATTCTGAAAAT TTCGAAATAAGGTGATTTAT
Downstream 100 bases:
>100_bases TTATTAAGTCTCTTTTGATAAATTCCATGTATTCTTAGATATTATTGTGAAAATCTATTGTGATATATGAAATATTTATC TTTAGAGACTTATTTTATAC
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSE LIDMPTKPGVIVSDTGSTKAMIQQHECSLLKHNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLK ELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNVQMWKDITLSNK TYILEMIGQLKSQFQDLEKLIESNDSEKLSSFFAEAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYILSLHNI SISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ
Sequences:
>Translated_363_residues MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSE LIDMPTKPGVIVSDTGSTKAMIQQHECSLLKHNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLK ELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNVQMWKDITLSNK TYILEMIGQLKSQFQDLEKLIESNDSEKLSSFFAEAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYILSLHNI SISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ >Mature_362_residues TTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAITNKYLSEL IDMPTKPGVIVSDTGSTKAMIQQHECSLLKHNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKE LLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNVQMWKDITLSNKT YILEMIGQLKSQFQDLEKLIESNDSEKLSSFFAEAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYILSLHNIS ISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 40244; Mature: 40113
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIK CCEEEEEHHHHHHHHHHCCCEEECCCCCEEEECCCHHHHHHHHHCCCHHHHHCCHHHHHH KADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHECSLLKHNIHLVSGH HCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEECC PMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDY CCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH VTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNVQMWKDITLSNK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEHHEEEECCC TYILEMIGQLKSQFQDLEKLIESNDSEKLSSFFAEAKSYRDALPAKQLGGLNTAYDLYVD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEE IPDESGMISKVTYILSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDC CCCCCCHHHHHHHHHHEECCCCCCEEEEEEHHHCCEEEEEEECCCCCHHHHHHHHHHCCC YIQ CCC >Mature Secondary Structure TTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIK CEEEEEHHHHHHHHHHCCCEEECCCCCEEEECCCHHHHHHHHHCCCHHHHHCCHHHHHH KADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHECSLLKHNIHLVSGH HCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEEECC PMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDY CCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH VTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNVQMWKDITLSNK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEHHEEEECCC TYILEMIGQLKSQFQDLEKLIESNDSEKLSSFFAEAKSYRDALPAKQLGGLNTAYDLYVD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEEE IPDESGMISKVTYILSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDC CCCCCCHHHHHHHHHHEECCCCCCEEEEEEHHHCCEEEEEEECCCCCHHHHHHHHHHCCC YIQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA