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The map label for this gene is 82750876

Identifier: 82750876

GI number: 82750876

Start: 1233871

End: 1235469

Strand: Direct

Name: 82750876

Synonym: SAB1137

Alternate gene names: NA

Gene position: 1233871-1235469 (Clockwise)

Preceding gene: 82750875

Following gene: 82750877

Centisome position: 44.99

GC content: 33.65

Gene sequence:

>1599_bases
ATGTATATCGTTGAAGTAGACGATGAAATGTTTATGTTAGATGCTGGACTTATGTTTCCAGAAGACGAAATGCTAGGTAT
TGATATTGTTATACCAGACATTTCATACGTACTTGAAAATAAAGATAAATTGAAGGGGATATTCCTTACACACGGACATG
AGCACGCGATTGGTGCAGTGAGTTATGTTTTAGAACAATTAGATGCACCAGTATATGGATCTAAATTGACAATAGCGTTA
ATTAAAGAAAATATGAAAGCCCGTAATATTGATAAAAAAGTTCGCTACTACACAGTTAATAATGATTCAATTATGAGATT
CAAAAACGTGAATATTAGTTTCTTTAATACGACACACAGTATTCCTGATAGTTTAGGTGTTTGTATTCACACTTCATATG
GTGCCATTGTGTATACAGGTGAATTTAAGTTTGACCAAAGTTTACATGGACATTATGCACCAGATATTAAACGTATGGCA
GAGATTGGTGAAGAAGGCGTATTTGTCTTAATCAGTGATTCTACTGAGGCAGAGAAACCTGGATATAATACTCCGGAAAA
TGTGATTGAACATCATATGTATGATGCTTTTGCAAAAGTGCGAGGTCGCTTGATAGTTTCATGTTATGCTTCGAACTTTA
TACGTATTCAGCAAGTTTTAAATATTGCTAGCAAGCTAAATCGTAAAGTGTCATTTTTAGGAAGATCACTTGAAAGTTCA
TTTAATATTGCTCGTAAAATGGGGTATTTCGACATTCCTAAAGATTTGCTAATTCCTATAACAGAAGTTGATAATTATCC
TAAAAATGAAGTGATAATTATAGCTACTGGTATGCAAGGAGAACCTGTAGAAGCTTTAAGTCAAATGGCGCAACATAAGC
ATAAAATTATGAATATTGAAGAAGGCGATTCTGTATTTTTAGCAATTACGGCTTCTGCTAATATGGAAGTTATCATTGCG
AATACATTAAATGAGCTTGTACGTGCTGGCGCACATATTATTCCAAATAACAAGAAGATTCATGCTTCAAGTCATGGTTG
CATGGAAGAATTAAAAATGATGATTAATATTATGAAACCTGAATACTTTATTCCTGTACAAGGTGAATTTAAAATGCAGA
TAGCACATGCGAAGCTTGCAGCTGAAGCAGGTGTTGCACCAGAAAAGATTTTCCTTGTGGAAAAAGGAGATGTCATTAAT
TACAACGGTAAAGATATGATATTAAATGAAAAGGTAAATTCAGGAAATATTTTAATAGATGGTATTGGTATTGGGGATGT
AGGAAATATCGTGTTGAGAGACCGTCATCTTTTAGCAGAAGATGGTATCTTTATTGCTGTAGTAACGTTAGATCCTAAAA
ATAGACGTATAGCTGCGGGACCTGAAATTCAATCTCGTGGATTTGTATATGTACGTGAAAGTGAAGACTTATTACGTGAA
GCAGAAGAGAAAGTACGTGAAATAGTAGAAGCTGGTTTACAAGAAAAACGCATAGAATGGTCTGAAATTAAGCAAAATAT
GCGTGATCAAATTAGTAAACTATTATTCGAAAGTACAAAACGTCGTCCTATGATTATTCCAGTAATTTCTGAAATTTAA

Upstream 100 bases:

>100_bases
GTAACAAATTTAGGAGGTAAGATTTTGAGTTTAATAAAGAAAAAGAATAAAGATATTCGCATTATACCATTAGGCCGGTG
TTGGCGAAATTGCTAAAAAT

Downstream 100 bases:

>100_bases
TCAAAAAGTCATTAACATAAAAGAGGTCAGAACAAGTCACCGAAATATAATGGTTGTCATGGACAATTTACTTATATTTT
ATGATGGTCAATTGAAAGGG

Product: metallo-beta-lactamase superfamily protein

Products: NA

Alternate protein names: RNase J2

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIAL
IKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIKRMA
EIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESS
FNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIA
NTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVIN
YNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLRE
AEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI

Sequences:

>Translated_532_residues
MYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIAL
IKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIKRMA
EIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESS
FNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIA
NTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVIN
YNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLRE
AEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI
>Mature_532_residues
MYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIAL
IKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIKRMA
EIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESS
FNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIA
NTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVIN
YNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLRE
AEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNJ2_STAA3 (Q2FHG3)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493865.1
- ProteinModelPortal:   Q2FHG3
- SMR:   Q2FHG3
- STRING:   Q2FHG3
- EnsemblBacteria:   EBSTAT00000036949
- GeneID:   3913610
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_1168
- eggNOG:   COG0595
- GeneTree:   EBGT00050000024729
- HOGENOM:   HBG497378
- ProtClustDB:   CLSK885243
- GO:   GO:0005737
- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- SMART:   SM00849
- TIGRFAMs:   TIGR00649

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL

EC number: NA

Molecular weight: Translated: 59886; Mature: 59886

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAV
CEEEEECCCEEEEECCCCCCCCCEEEEEEEECCHHHHHCCCCCCCEEEEECCCCHHHHHH
SYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHS
HHHHHHHCCCCCCCEEEEEEEECCCHHCCCCCEEEEEEECCCCEEEEEECEEEEEECCCC
IPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKP
CCCCCCEEEEECCCEEEEEECEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC
GYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESS
CCCCHHHHHHHHHHHHHHHHCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIE
HHHHHHCCCCCCCHHHEEEEHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
EGDSVFLAITASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKP
CCCEEEEEEEECCCEEEEEHHHHHHHHHCCCEECCCCCEEECCCCHHHHHHHHHHHHCCC
EYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILID
CEEEECCCCEEEEEEHHHHHHHCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCCEEEE
GIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLRE
EECCCCCCCEEEECCEEEECCCEEEEEEEECCCCCEEECCCCCCCCCEEEEECCHHHHHH
AEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAV
CEEEEECCCEEEEECCCCCCCCCEEEEEEEECCHHHHHCCCCCCCEEEEECCCCHHHHHH
SYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHS
HHHHHHHCCCCCCCEEEEEEEECCCHHCCCCCEEEEEEECCCCEEEEEECEEEEEECCCC
IPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKP
CCCCCCEEEEECCCEEEEEECEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCC
GYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESS
CCCCHHHHHHHHHHHHHHHHCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIE
HHHHHHCCCCCCCHHHEEEEHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
EGDSVFLAITASANMEVIIANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKP
CCCEEEEEEEECCCEEEEEHHHHHHHHHCCCEECCCCCEEECCCCHHHHHHHHHHHHCCC
EYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILID
CEEEECCCCEEEEEEHHHHHHHCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCCEEEE
GIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLRE
EECCCCCCCEEEECCEEEECCCEEEEEEEECCCCCEEECCCCCCCCCEEEEECCHHHHHH
AEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI
HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA