| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is catE [H]
Identifier: 82750800
GI number: 82750800
Start: 1141345
End: 1142142
Strand: Direct
Name: catE [H]
Synonym: SAB1058
Alternate gene names: 82750800
Gene position: 1141345-1142142 (Clockwise)
Preceding gene: 82750799
Following gene: 82750801
Centisome position: 41.62
GC content: 31.95
Gene sequence:
>798_bases ATGTATCATAACAGTAACGCAAACTTTGTAAATGGTATCACTTTAAATGTAAGAGATAAGAATGAATTAAAGCCATTTTA TGAGGACGTATTAGGATTAAATATTATAAATGAGACATTAACATCGATACAATATGAAGTAGGTCAAAATAATCATGTCA TTACACTTGTTGAATTACAAAATGGACGTGAACCTTTAATGTCAGAAGCGGGACTGTTTCATATCGCAATTAAACTACCT CAAATTAGTGATTTAGCTAATTTACTAATTCATTTAAGCGAATATGATATTCCAGTTAACGGAGGTATACAGCCTGCTTC GTTATCATTATTTTTTGAAGACCCGGAAGGAAACGGTTTTAAATTTTATGTTGATAAAGACGAAGCGCAATGGACGAGGC AAAATGATTTAGTAAAAATTGATATTAGACCATTAAATGTACCGAGATTAGTGAGTCATGCAACAAAATTGTTATGGTTA GGTATTCCAGATGACGCTATTATAGGTGCGTTGCATATTAAGACAATTCATTTATCAGAGGTAAAAGACTACTACCTCGA TTATTTTGGATTAGAGCAATCAGCATATATGGATGATTATTCAATATTTTTAGCATCGAATGGCTATTATCAACATTTGG CCATGAATGATTGGGTATCAGCAACGAAACGTGTAGAAAATTTTGATACGTATGGATTAGCAATTGTTGACTTTCATTAT CCTGAAACAACACATTTAAATTTACAAGGTCCGGATGGTATCTATTATCGCTTTAATCATATCGAAGTTGAAGATTAG
Upstream 100 bases:
>100_bases TGAAGCTTATAAATGCGTTATAGTTGCTATTCTCAATTATGTTCGCGATAATTTTAAGTAAAAGTAAGCACAGATATTGA ATTTGATAGGAGTTAATTGA
Downstream 100 bases:
>100_bases TATATACTTTGAATGGACGAACCATATAATGAATCGTTTTTAATGATCTTTTTATACAAGCTATGAAGGAGACTGGGACA TAAAGTTCTTAGGCAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MYHNSNANFVNGITLNVRDKNELKPFYEDVLGLNIINETLTSIQYEVGQNNHVITLVELQNGREPLMSEAGLFHIAIKLP QISDLANLLIHLSEYDIPVNGGIQPASLSLFFEDPEGNGFKFYVDKDEAQWTRQNDLVKIDIRPLNVPRLVSHATKLLWL GIPDDAIIGALHIKTIHLSEVKDYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDWVSATKRVENFDTYGLAIVDFHY PETTHLNLQGPDGIYYRFNHIEVED
Sequences:
>Translated_265_residues MYHNSNANFVNGITLNVRDKNELKPFYEDVLGLNIINETLTSIQYEVGQNNHVITLVELQNGREPLMSEAGLFHIAIKLP QISDLANLLIHLSEYDIPVNGGIQPASLSLFFEDPEGNGFKFYVDKDEAQWTRQNDLVKIDIRPLNVPRLVSHATKLLWL GIPDDAIIGALHIKTIHLSEVKDYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDWVSATKRVENFDTYGLAIVDFHY PETTHLNLQGPDGIYYRFNHIEVED >Mature_265_residues MYHNSNANFVNGITLNVRDKNELKPFYEDVLGLNIINETLTSIQYEVGQNNHVITLVELQNGREPLMSEAGLFHIAIKLP QISDLANLLIHLSEYDIPVNGGIQPASLSLFFEDPEGNGFKFYVDKDEAQWTRQNDLVKIDIRPLNVPRLVSHATKLLWL GIPDDAIIGALHIKTIHLSEVKDYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDWVSATKRVENFDTYGLAIVDFHY PETTHLNLQGPDGIYYRFNHIEVED
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 30340; Mature: 30340
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHNSNANFVNGITLNVRDKNELKPFYEDVLGLNIINETLTSIQYEVGQNNHVITLVELQ CEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEC NGREPLMSEAGLFHIAIKLPQISDLANLLIHLSEYDIPVNGGIQPASLSLFFEDPEGNGF CCCCCHHHCCCEEEEEEECCCHHHHHHHHEEHHHCCCCCCCCCCCEEEEEEEECCCCCCE KFYVDKDEAQWTRQNDLVKIDIRPLNVPRLVSHATKLLWLGIPDDAIIGALHIKTIHLSE EEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHCEEEEEEECCCHHEEEEEEEEEEEHHH VKDYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDWVSATKRVENFDTYGLAIVDFHY HHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEC PETTHLNLQGPDGIYYRFNHIEVED CCCEEEEEECCCCEEEEEEEEEECC >Mature Secondary Structure MYHNSNANFVNGITLNVRDKNELKPFYEDVLGLNIINETLTSIQYEVGQNNHVITLVELQ CEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEC NGREPLMSEAGLFHIAIKLPQISDLANLLIHLSEYDIPVNGGIQPASLSLFFEDPEGNGF CCCCCHHHCCCEEEEEEECCCHHHHHHHHEEHHHCCCCCCCCCCCEEEEEEEECCCCCCE KFYVDKDEAQWTRQNDLVKIDIRPLNVPRLVSHATKLLWLGIPDDAIIGALHIKTIHLSE EEEEECCCCCCCCCCCEEEEEEEECCCHHHHHHCEEEEEEECCCHHEEEEEEEEEEEHHH VKDYYLDYFGLEQSAYMDDYSIFLASNGYYQHLAMNDWVSATKRVENFDTYGLAIVDFHY HHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCEEEEEEEEC PETTHLNLQGPDGIYYRFNHIEVED CCCEEEEEECCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]