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The map label for this gene is fib

Identifier: 82750764

GI number: 82750764

Start: 1104470

End: 1104967

Strand: Direct

Name: fib

Synonym: SAB1021

Alternate gene names: 82750764

Gene position: 1104470-1104967 (Clockwise)

Preceding gene: 82750763

Following gene: 82750765

Centisome position: 40.27

GC content: 30.72

Gene sequence:

>498_bases
ATGAAAAATAAATTGATAGCAAAATCTTTATTAACAATAGCGGTAATTGGTATTACTACAACTACAATTGCGTCAACAGC
AGATGCGAGCGAAGGGTACGGTCCAAGAGAAAAGAAACCAGTGAGTATTAATCACAATATCGTAGAGTACAATGATGGTA
CTTTTAAATATCAATCTAGACCAAAATTTAACTCAACACCTAAATATATTAAATTCAAACATGACTATAATATTTTAGAA
TTTAACGATGGTACATTCGAATATGGTGCACGTCCACAATTTAATAAACCAGCAGCGAAAACTGATGCAACTATTAAAAA
AGAACAAAAATTGATTCAAGCTCAAAATCTTGTGAGAGAATTTGAAAAAACACATACTGTCAGTGCACACAGAAAAGCAC
AAAAGGCAGTCAACTTAGTTTCGTTTAAATACAAAGTTAAGAAAATGGTCTTACAAGAGCGAATTGATAATGTATTAAAA
CAAGGATTAGTAAAATAA

Upstream 100 bases:

>100_bases
TATAAAGTGTTTATAGTTAATTAATAATTAGTTAATTTCAAAAGTTGTATAAATAGGATAACTTAATAAATGTAAGATAA
TAATTTGGAGGATAATTAAC

Downstream 100 bases:

>100_bases
AACTTCAATCGTTGCTGTTATGTGGAAATAAATAATTAAATGTTATGTTAATTTTTATTAATGAAAAAAAGTAATCTATT
TAATGACAGGTTAATGTAAT

Product: fibrinogen-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKNKLIAKSLLTIAVIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILE
FNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFKYKVKKMVLQERIDNVLK
QGLVK

Sequences:

>Translated_165_residues
MKNKLIAKSLLTIAVIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILE
FNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFKYKVKKMVLQERIDNVLK
QGLVK
>Mature_165_residues
MKNKLIAKSLLTIAVIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILE
FNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFKYKVKKMVLQERIDNVLK
QGLVK

Specific function: Binds to host fibrinogen [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021033 [H]

Pfam domain/function: PF12199 efb-c [H]

EC number: NA

Molecular weight: Translated: 18792; Mature: 18792

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLIAKSLLTIAVIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEECCCEEEECCC
PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
CCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FEKTHTVSAHRKAQKAVNLVSFKYKVKKMVLQERIDNVLKQGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNKLIAKSLLTIAVIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEEECCCEEEECCC
PKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVRE
CCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FEKTHTVSAHRKAQKAVNLVSFKYKVKKMVLQERIDNVLKQGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA