| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82750733
Identifier: 82750733
GI number: 82750733
Start: 1071293
End: 1072432
Strand: Reverse
Name: 82750733
Synonym: SAB0990c
Alternate gene names: NA
Gene position: 1072432-1071293 (Counterclockwise)
Preceding gene: 82750736
Following gene: 82750730
Centisome position: 39.1
GC content: 32.63
Gene sequence:
>1140_bases ATGAAAAGCGTTGGCTTAATCACAGAATATAATCCCTTTCATAATGGGCATCAATATCATATTAATCAATCTAAAAAACT TACAAATGCTGACGTTACTATTGCAATAATGAGTGGTAACTTTGTCATGCGTGGCGAACCAGCAATCTATAATAAGTTTA CTCGTGCAAAAATGGCATTATCAACAGCTGATTTAGTTATCGAACTACCAGCAACTGCCAGTTTATCATCTGGCGATCAT TTTGCCGAACTAGCAGTTAAAGTCGCAGATTATATGAGTGTCGATACAATTGCATTTGGTAGTGAAAATAATGATATCAA AACATTAAAGCAATTAGCTCACAGCATTAATGAAATTGAACAATCCGAATCCTTTTCACAAAAAGTAAAAGAAGGTAAAA GCTACCCTCGTATCATTAGCGAATTATTAGAGCATCATGAAGCACTAGCAAGTCCTAACAACATACTTGGTATTAGTTAT CTGAAAGCAATTGCTAAACATGCTAAAAACATCAATGCAATTTCTATTAAGCGAGAAAATGCTCAACATCATGATTCATT AATTCAACATCATCAGTTTGCAAGTGGTACATCTATTAGAACATCAATCATTAGTCAAGATGATCATTGGCATCATGTGG TACCTAAAGATATTCAACACCTGTACGTAACACCTCATATAACATTAAATCAAATATTCCCATATTTGAAATATCAAATC ATAGCTATGACTACAGAGTCATTAAAGAATATTTATACTGTTAATGAAGGTTTTGAAAATCGTTTAAAATCTACCATTAA TGAAGCAACTGATTTTCATCATTTTGTAAAATCACTAAAAACAAAGCGTTATACATATACGCATATCCAAAGACTGTTAA TGAATGTATTATTAAACATTAAACCTACAGATGTTACGAGAAACATTCGCGCAGTTAAAGTATTAGCGATGAACGACCGT GGCAGACAATATTTAAAGCATTTAAAAACAGCGTTCCCAGAAAGACAATATATAACCAATATTAACAAAAGCAATGCACA TTACTTCACAAATGAAATCAAAGCAACACACATATACAATGCAATAAGCGGGCAACAACAAACAGATTTCAACACGCCTG TCATACAGCAATATCGTTAA
Upstream 100 bases:
>100_bases ATTTATTTTAACTTTCTAAGAACAAGTTGTCAAGATTTTTTCTTAACATATCATGTTCTGTTACAATATTAATAATGAAT ACCGAAAGGACGAATTGCAA
Downstream 100 bases:
>100_bases CAAATGAAAACAGTATTTTAGGATTGTAAACCATGATAAACCTAAAATACTGTTATTTTTATTACTTAAATTTCTTCTTC AATGCCTTTTCAACATAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMALSTADLVIELPATASLSSGDH FAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIEQSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISY LKAIAKHAKNINAISIKRENAQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI IAMTTESLKNIYTVNEGFENRLKSTINEATDFHHFVKSLKTKRYTYTHIQRLLMNVLLNIKPTDVTRNIRAVKVLAMNDR GRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYNAISGQQQTDFNTPVIQQYR
Sequences:
>Translated_379_residues MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMALSTADLVIELPATASLSSGDH FAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIEQSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISY LKAIAKHAKNINAISIKRENAQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI IAMTTESLKNIYTVNEGFENRLKSTINEATDFHHFVKSLKTKRYTYTHIQRLLMNVLLNIKPTDVTRNIRAVKVLAMNDR GRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYNAISGQQQTDFNTPVIQQYR >Mature_379_residues MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMALSTADLVIELPATASLSSGDH FAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIEQSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISY LKAIAKHAKNINAISIKRENAQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI IAMTTESLKNIYTVNEGFENRLKSTINEATDFHHFVKSLKTKRYTYTHIQRLLMNVLLNIKPTDVTRNIRAVKVLAMNDR GRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYNAISGQQQTDFNTPVIQQYR
Specific function: Unknown
COG id: COG1323
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0348 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR008513 [H]
Pfam domain/function: PF05636 DUF795 [H]
EC number: NA
Molecular weight: Translated: 43291; Mature: 43291
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMAL CCCCCCEECCCCCCCCCEEEECCCCEECCCCEEEEEEECCEEEECCCHHHHHHHHHHHHH STADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIE HHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHH QSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKHAKNINAISIKREN HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEEECCC AQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI CHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCEEHHHHHHHHHHEE IAMTTESLKNIYTVNEGFENRLKSTINEATDFHHFVKSLKTKRYTYTHIQRLLMNVLLNI EEEEHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC KPTDVTRNIRAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYN CCCHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEEHHHHHHHHHHH AISGQQQTDFNTPVIQQYR HHCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMAL CCCCCCEECCCCCCCCCEEEECCCCEECCCCEEEEEEECCEEEECCCHHHHHHHHHHHHH STADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIE HHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHH QSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKHAKNINAISIKREN HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEEEECCC AQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQI CHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCEEHHHHHHHHHHEE IAMTTESLKNIYTVNEGFENRLKSTINEATDFHHFVKSLKTKRYTYTHIQRLLMNVLLNI EEEEHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC KPTDVTRNIRAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYN CCCHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEEHHHHHHHHHHH AISGQQQTDFNTPVIQQYR HHCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12044378 [H]