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The map label for this gene is oppB

Identifier: 82750599

GI number: 82750599

Start: 924756

End: 925682

Strand: Direct

Name: oppB

Synonym: SAB0852

Alternate gene names: 82750599

Gene position: 924756-925682 (Clockwise)

Preceding gene: 82750596

Following gene: 82750600

Centisome position: 33.72

GC content: 32.79

Gene sequence:

>927_bases
ATGGGGAAATATATTTTTAAACGATTTATTTATATGCTTATTTCTTTATTTATTATTATTACAATTACATTTTTCTTAAT
GAAATTAATACCAGGTTCGCCATTTAACGATGCTAAATTAAATGCTGAACAAAAAGAAATTTTAAATGAAAAATATGGAT
TAAATGATCCTGTAGCTACGCAGTATTTACATTATTTAAAAAATGTTGTTACAGGTGATTTTGGTAATTCATTCCAGTAT
CATAATCAACCTGTGTGGGATTTGATTAAACCGAGGCTACTACCTTCTTTTGAAATGGGTCTTACAGCAATGTTCATCGG
TGTGATACTGGGACTTATTTTAGGTGTTGCAGCAGCTACTAAACAAAATTCTTGGGTTGACTATACAACTACAGTTATTT
CAGTTATTGCAGTATCTGTACCATCTTTTGTACTTGCTGTACTTTTACAATATGTATTTGCAGTTAAATTGAGATGGTTC
CCAGTAGCTGGATGGGAAGGCTTTTCGACCGCGGTATTACCGTCACTTGCATTATCTGCAGCTGTTTTAGCAACTGTCGC
CAGATACATAAGAGCAGAGATGATAGAGGTATTAAGTTCAGACTACATTTTATTAGCGAGAGCTAAAGGTAATTCGACAA
TGCGTGTACTTTTTGGACATGCACTTAGAAATGCTTTAATTCCAATTATTACAATTATCGTTCCCATGTTAGCAAGTATT
TTAACAGGCACTTTAACAATTGAAAATATTTTTGGGGTTCCTGGATTAGGGGATCAATTCGTACGTTCAATTACAACAAA
TGATTTCTCAGTAATCATGGCAATCACACTATTATTTAGCACACTGTTTATCGTTTCTATTTTTATTGTAGATATTTTAT
ACGGTGTGATAGATCCACGAATTCGTGTTCAAGGAGGTAAAAAATAA

Upstream 100 bases:

>100_bases
TATATAGTAAATATTGTATATATAATATTAGTTAAGATTTCAGAAAATTTCGAAGGGAATGGAAATTTAGAAATCGGAAT
TTGTTAGAGGAGGGGATTAG

Downstream 100 bases:

>100_bases
TGGCTGAAAATAAAAACAATTTGTCGATTAACGACGATCATTCTAATGCAGCTATGACGCATACCTCTGACGCTATCGCA
TCATCTGATTTTATTATTAG

Product: peptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MGKYIFKRFIYMLISLFIIITITFFLMKLIPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQY
HNQPVWDLIKPRLLPSFEMGLTAMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWF
PVAGWEGFSTAVLPSLALSAAVLATVARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASI
LTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK

Sequences:

>Translated_308_residues
MGKYIFKRFIYMLISLFIIITITFFLMKLIPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQY
HNQPVWDLIKPRLLPSFEMGLTAMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWF
PVAGWEGFSTAVLPSLALSAAVLATVARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASI
LTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK
>Mature_307_residues
GKYIFKRFIYMLISLFIIITITFFLMKLIPGSPFNDAKLNAEQKEILNEKYGLNDPVATQYLHYLKNVVTGDFGNSFQYH
NQPVWDLIKPRLLPSFEMGLTAMFIGVILGLILGVAAATKQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWFP
VAGWEGFSTAVLPSLALSAAVLATVARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASIL
TGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPRIRVQGGKK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=44.5901639344262, Blast_Score=257, Evalue=8e-70,
Organism=Escherichia coli, GI1787053, Length=307, Percent_Identity=38.7622149837134, Blast_Score=224, Evalue=4e-60,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=33.1360946745562, Blast_Score=181, Evalue=5e-47,
Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=31.5286624203822, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787761, Length=324, Percent_Identity=30.5555555555556, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=25.2747252747253, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=26.3940520446097, Blast_Score=98, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34125; Mature: 33994

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYIFKRFIYMLISLFIIITITFFLMKLIPGSPFNDAKLNAEQKEILNEKYGLNDPVAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH
QYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLTAMFIGVILGLILGVAAAT
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWFPVAGWEGFSTAVLPSLALSA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
AVLATVARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPR
HHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IRVQGGKK
EEECCCCC
>Mature Secondary Structure 
GKYIFKRFIYMLISLFIIITITFFLMKLIPGSPFNDAKLNAEQKEILNEKYGLNDPVAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH
QYLHYLKNVVTGDFGNSFQYHNQPVWDLIKPRLLPSFEMGLTAMFIGVILGLILGVAAAT
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQNSWVDYTTTVISVIAVSVPSFVLAVLLQYVFAVKLRWFPVAGWEGFSTAVLPSLALSA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
AVLATVARYIRAEMIEVLSSDYILLARAKGNSTMRVLFGHALRNALIPIITIIVPMLASI
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGTLTIENIFGVPGLGDQFVRSITTNDFSVIMAITLLFSTLFIVSIFIVDILYGVIDPR
HHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IRVQGGKK
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]