| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82750531
Identifier: 82750531
GI number: 82750531
Start: 849600
End: 850355
Strand: Direct
Name: 82750531
Synonym: SAB0781
Alternate gene names: NA
Gene position: 849600-850355 (Clockwise)
Preceding gene: 82750530
Following gene: 82750532
Centisome position: 30.98
GC content: 35.05
Gene sequence:
>756_bases ATGAAAACATACAGTGAAGCAAGAGCAAGGTTACGTTGGTATCAAGGTAGGTATATTGATTTTGACGGTTGGTATGGTTA TCAATGTGCAGATTTAGCAGTTGATTACATTTATTGGTTGTTAGAAATTAGAATGTGGGGAAATGCAAAAGATGCAATCA ATAACGATTTTAAAAACATGGCAACAGTATATGAAAACACACCATCGTTTGTTCCACAAATAGGTGATGTGGCTGTATTT ACCAAAGGAATATATAAACAATACGGTCATATTGGTTTAGTGTTTAATGGTGGTAATACAAATCAATTTTTAATTTTGGA ACAGAACTATGACGGTAACGCAAATACGCCTGCAAAGTTACGTTGGGATAATTATTACGGCTGTACTCACTTTATTAGAC CTAAGTATAAAAGTGAGGGCTTAATGAATAAGATCACAAATAAAGTTAAACCACCTGCTCAAAAAGCAGTCGGTAAATCT GCAAGTAAAATAACAGTTGGAAGTAAAGCGCCTTATAACCTTAAATGGTCAAAAGGTGCTTATTTTAATGCGAAAATCGA CGGCTTAGGTGCTACTTCAGCCACTAGATACGGTGATAATCGTACTAACTATAGATTCGATGTTGGACAGGCTATATATG CGCCTGGAACATTAATATATGTGTTTGAAATTATAGATGGTTGGTGCCGTATTTACTGGAACAACCATAATGAGTGGGTA TGGCATGAAAGATTGATTGTGAAAGAAGTTTATTGA
Upstream 100 bases:
>100_bases TAACTGGTGTGATTCAAGACCCGACTACTAAAGGTATAGGTGATAGCCACCAAGCTTTAGAATATGAAGAACCAAGTAGA AAATACTAGGAGGTAAAATA
Downstream 100 bases:
>100_bases AAACGCACAGTTAATAAAAAGATAATAAATAGTTAATTTTATGTAATTTTCTTGTTTAACAGAAAAATCAAATATTTTAA TGTATATTGAATTTAATATT
Product: lytic enzyme
Products: NA
Alternate protein names: Autolysin; Phage N-Acetylmuramoyl-L-Alanine Amidase; CHAP Domain-Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase; Prophage Amidase
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIRMWGNAKDAINNDFKNMATVYENTPSFVPQIGDVAVF TKGIYKQYGHIGLVFNGGNTNQFLILEQNYDGNANTPAKLRWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKS ASKITVGSKAPYNLKWSKGAYFNAKIDGLGATSATRYGDNRTNYRFDVGQAIYAPGTLIYVFEIIDGWCRIYWNNHNEWV WHERLIVKEVY
Sequences:
>Translated_251_residues MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIRMWGNAKDAINNDFKNMATVYENTPSFVPQIGDVAVF TKGIYKQYGHIGLVFNGGNTNQFLILEQNYDGNANTPAKLRWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKS ASKITVGSKAPYNLKWSKGAYFNAKIDGLGATSATRYGDNRTNYRFDVGQAIYAPGTLIYVFEIIDGWCRIYWNNHNEWV WHERLIVKEVY >Mature_251_residues MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIRMWGNAKDAINNDFKNMATVYENTPSFVPQIGDVAVF TKGIYKQYGHIGLVFNGGNTNQFLILEQNYDGNANTPAKLRWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKS ASKITVGSKAPYNLKWSKGAYFNAKIDGLGATSATRYGDNRTNYRFDVGQAIYAPGTLIYVFEIIDGWCRIYWNNHNEWV WHERLIVKEVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29074; Mature: 29074
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIRMWGNAKDAINNDFKNM CCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ATVYENTPSFVPQIGDVAVFTKGIYKQYGHIGLVFNGGNTNQFLILEQNYDGNANTPAKL HHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEE RWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKSASKITVGSKAPYNLKWSKGA EECCCCCEEHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCEEECCCC YFNAKIDGLGATSATRYGDNRTNYRFDVGQAIYAPGTLIYVFEIIDGWCRIYWNNHNEWV EEEEEECCCCCCCHHCCCCCCCCEEEECCCEEECCCCEEEHEEHHCCEEEEEECCCCCEE WHERLIVKEVY EEHEEEEEECC >Mature Secondary Structure MKTYSEARARLRWYQGRYIDFDGWYGYQCADLAVDYIYWLLEIRMWGNAKDAINNDFKNM CCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH ATVYENTPSFVPQIGDVAVFTKGIYKQYGHIGLVFNGGNTNQFLILEQNYDGNANTPAKL HHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEE RWDNYYGCTHFIRPKYKSEGLMNKITNKVKPPAQKAVGKSASKITVGSKAPYNLKWSKGA EECCCCCEEHCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCEEECCCC YFNAKIDGLGATSATRYGDNRTNYRFDVGQAIYAPGTLIYVFEIIDGWCRIYWNNHNEWV EEEEEECCCCCCCHHCCCCCCCCEEEECCCEEECCCCEEEHEEHHCCEEEEEECCCCCEE WHERLIVKEVY EEHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA